| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4856141 = | 39 (0.860) | 4 (0.100) | 4/220 | NT | 8.5% | intergenic (+68/+128) | PP_4270/PP_5670 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | 4856228 = | 52 (1.300) | intergenic (+155/+41) | PP_4270/PP_5670 | hypothetical protein/hypothetical protein | |||||
TCAGCGTGGCGTTTGAACGTAAAGGCCGGTGACGTTGAGTTTGTGATAGAGATTGTGAATGTGCCGCACAATGCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4856300‑4856141‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTCTTCGT > NC_002947/4856228‑4856372 TCAGCGTGGCGTTTGAACGTAAAGGCCGGTGACGTTGAGTTTGTGATAGAGATTGTGAATGTGCCGCACAATGCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCC > 1:836096/1‑150TCAGCGTGGCGTTTGAACGTAAAGGCCGGTGACGTTGAGTTTGTGATAGAGATTGTGAATGTGCCGCACAATGCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCC > 2:266847/1‑150 AGAGATTGTGAATGTGCCGCACAATGCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCT > 1:548495/1‑106 AGAGATTGTGAATGTGCCGCACAATGCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCT < 2:548495/106‑1 GGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGA > 2:52418/1‑150 CCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAAC > 1:491673/1‑109 CCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAAC < 2:491673/109‑1 GCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGACTTTAAGTTCAAACGACACGCTGACACCAACCGC > 2:671972/1‑150 CCCGCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGT < 2:490925/150‑1 GCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTC > 2:153700/1‑150 CCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTCTTC < 1:153700/150‑1 CCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTCTTC < 1:52418/150‑1 CACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTCTTCGT > 1:413578/1‑150 CACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTCTTCGT > 1:761140/1‑150 CACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGG < 1:224907/99‑1 CACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGG > 2:224907/1‑99 TCAGCGTGGCGTTTGAACGTAAAGGCCGGTGACGTTGAGTTTGTGATAGAGATTGTGAATGTGCCGCACAATGCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4856300‑4856141‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTCTTCGT > NC_002947/4856228‑4856372 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |