New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4856154	45 (1.000)	4 (0.100)	4/220	NT	8.0%	intergenic (+81/+115)	PP_4270/PP_5670	hypothetical protein/hypothetical protein
	?	NC_002947	= 4856213	52 (1.300)					intergenic (+140/+56)	PP_4270/PP_5670	hypothetical protein/hypothetical protein

GGGCGACCCGGACAGTATGTCTGTGGCCCGGCCCGAAATACCCAGCAAAATGCCGGCACACAGCCAGCGCAACTAACGGCCCTGCTCATTTCGCGACCGCTTGCGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4855998‑4856154 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgggagcgggcATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGGATCGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCGCAAGCGGTCGCGAAATGAGCAGGGCCGTTAGTTGC  <  NC_002947/4856213‑4856066                                                                                                                                                                                                                                                                                                                   GGGCGACCCGGACAGTATGTCTGTGGCCCGGCCCGAAATACCCAGCAAAATGCCGGCACACAGCCAGCGCAACTAACGGCCCTGCTCATTTCGCGACCGCTTGCGCAACTGTCTTGCTCAATTTCTAAAAGCTGGTGCGATCCCTGTGGG                                                                                                                                                             >  2:150011/1‑150                                 CCGAAATACCCAGCAAAATGCCGGCACACAGCCAGCGCAACTAACGGCCCTGCTCATTTCGCGACCGCTTGCGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGTGG                                                                                                                                                              >  1:218912/1‑117                                 CCGAAATACCCAGCAAAATGCCGGCACACAGCCAGCGCAACTAACGGCCCTGCTCATTTCGCGACCGCTTGCGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGTGG                                                                                                                                                              <  2:218912/117‑1                                                                CCAGCGCAACTAACGGCCCTGCTCATTTCGCGACCGCTTGCGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGG                                                                                              >  1:1015632/1‑150                                                                       AACTAACGGCCCTGCTCATTTCGCGACCGCTTGCGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCC                                                                                       <  2:1015632/150‑1                                                                                                         GCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCC                                                                                        <  1:187362/115‑1                                                                                                         GCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCC                                                                                        >  2:187362/1‑115                                                                                                                                                CTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGGATCGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCGCAAGCGGTCGCGAAATGAGCAGG              >  2:1100058/1‑150                                                                                                                                                  GTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGGATCGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCGCAAGC                                >  1:767665/1‑130                                                                                                                                                  GTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGAGCAATCCCGCTCCCACAGGGATCGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCGCAAGC                                <  2:767665/130‑1                                                                                                                                                   TGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGTTCCCACAGGGATCGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCGCAAGCGGTCGCGAAATGAGCAGGGCC           <  2:836096/150‑1                                                                                                                                                     GGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGGATCGCACCAGCTTTTAGAAATTGAGCAAGACAGTTGCGCAAGCGGTCGCGAAATGAGCAGGGCCGT         >  1:150011/1‑150                                                                                                                                                          GGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGGATCGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCGCAAGGGGTCGCGAAATGAGCAGGGCCGTTAGTT    <  1:32536/150‑1                                                                                                                                                          GGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGGATCGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCGCAAGCGGTCGCGAAATGAGCAGGGCCGTTAGTT    <  1:490925/150‑1                                                                                                                                                            GCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGGATCGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCGCAAGCGGTCGCGAAATGAGCAGGGCCGTTAGTTGC  <  2:367211/150‑1                                                                                                                                                                                                                                                                                                                   GGGCGACCCGGACAGTATGTCTGTGGCCCGGCCCGAAATACCCAGCAAAATGCCGGCACACAGCCAGCGCAACTAACGGCCCTGCTCATTTCGCGACCGCTTGCGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4855998‑4856154 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgggagcgggcATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGGATCGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCGCAAGCGGTCGCGAAATGAGCAGGGCCGTTAGTTGC  <  NC_002947/4856213‑4856066

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.