| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4907446 = | 50 (1.110) | 8 (0.180) | 8/246 | NT | 13.4% | coding (388/939 nt) | PP_4316 | D‑isomer specific 2‑hydroxyacid dehydrogenase family protein |
| ? | NC_002947 | 4907477 = | 54 (1.210) | coding (357/939 nt) | PP_4316 | D‑isomer specific 2‑hydroxyacid dehydrogenase family protein | |||||
CATCCCCCGCGCCGATGCCAGCACGCGGCGCGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4907480‑4907446‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAGCGGCGGCGGCCAG > NC_002947/4907477‑4907587 CATCCCCCGCGCCGATGCCAGCACGCGGCGCGGTGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCC < 1:956341/100‑1CATCCCCAGCGCCGATGCCAGCACGCGGCGCGGTGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCC > 2:956341/1‑100 TCCCCCGCGCCGATGCCAGCACGCGGCGCGGTGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCG > 1:1033383/1‑126 TCCCCCGCGCCGATGCCAGCACGCGGCGCGGTGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCG < 2:1033383/126‑1 CCCCCGCGCCGATGCCAGCACGCGGCGCGGTGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAGCGGCGGCGGCCAG > 1:647184/1‑143 CCCCCGCGCCGATGCCAGCACGCGGCGCGGTGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAGCGGCGGCGGCCAG < 2:647184/143‑1 CCCGCGCCGATGCCAGCACGCGGCGCGGTGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGT < 1:452/66‑1 CCCGCGCCGATGCCAGCACGCGGCGCGGTGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGT > 2:452/1‑66 CATCCCCCGCGCCGATGCCAGCACGCGGCGCGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4907480‑4907446‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAGCGGCGGCGGCCAG > NC_002947/4907477‑4907587 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |