New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5383976 =	66 (1.460)	3 (0.070)	3/230	NT	5.0%	coding (392/1671 nt)	lldP	L‑lactate permease
	?	NC_002947	5384018 =	54 (1.290)					coding (434/1671 nt)	lldP	L‑lactate permease
Rejected: Frequency below/above cutoff threshold.

CTGGCCGGCCACGATGATCGGGATGCCCAGGGCGCCGAAGGCCACTGGCGCGGTGTTGGCGATCAGGCACAGGCCGGCAGCGTACAGCGGGTTGAAGCCCAGGCCCACCAGCAGTGCGGCAGTGATGGCCACCGGTGCGCCAAAGCCTGCCGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5384130‑5383976 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgccgcacTGCTGGTGGGCCTGGGCTTCAACCCGCTGTACGCTGCCGGCCTGTGCCTGATCGCCAACACCGCGCCAGTGGCCTTCGGCGCCCTGGGCATCCCGATCATCGTGGCCGGCC  >  NC_002947/5384018‑5384128                                                                                                                                                                                                                                                                            CTGGCCGGCCACGATGATCGGGATGCCCAGGGCGCCGAAGGCCACTGGCGCGGTGTTGGCGATCAGGCACAGGCCGGCAGCGTACAGCGGGTTGAAGCCCAGGCCCACCAGCAGTGCGGCAGTGATGGCCACCGGTGCGCCAAAGCCTGC                                                                                                                      >  1:804479/1‑150  TGGCCGGCCACGATGATCGGGATGCCCAGGGCGCCGAAGGCCACTGGCGCGGTGTTGGCGATCAGGCACAGGCCGGCAGCGTACAGCGGGTTGAAGCCCAGGCCCACCAGCAGTGCGGCAGTGATGGCCACCGGTGCGCCAAAGCCTGCC                                                                                                                     <  2:669985/150‑1                                                                                                                     CGGCAGTGATGGCCACCGGTGCGCCAAAGCCTGCCGCACTGCTGGTGGGCCTGGGCTTCAACCCGCTGTACGCTGCCGGCCTGTGCCTGATCGCCAACACCGCGCCAGTGGCCTTCGGCGCCCTGGGCATCCCGATCATCGTGGTCGGCC  >  2:163979/1‑150                                                                                                                         AGTGATGGCCACCGGTGCGCCAAAGCCTGCCGCACTGCTGGTGGGCCTGGG                                                                                                 <  1:1187470/51‑1                                                                                                                         AGTGATGGCCACCGGTGCGCCAAAGCCTGCCGCACTGCTGGTGGGCCTGGG                                                                                                 >  2:1187470/1‑51                                                                                                                                                                                                                                                                            CTGGCCGGCCACGATGATCGGGATGCCCAGGGCGCCGAAGGCCACTGGCGCGGTGTTGGCGATCAGGCACAGGCCGGCAGCGTACAGCGGGTTGAAGCCCAGGCCCACCAGCAGTGCGGCAGTGATGGCCACCGGTGCGCCAAAGCCTGCCGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5384130‑5383976 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgccgcacTGCTGGTGGGCCTGGGCTTCAACCCGCTGTACGCTGCCGGCCTGTGCCTGATCGCCAACACCGCGCCAGTGGCCTTCGGCGCCCTGGGCATCCCGATCATCGTGGCCGGCC  >  NC_002947/5384018‑5384128

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.