| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5424553 | 46 (1.020) | 4 (0.100) | 4/230 | NT | 8.3% | coding (104/915 nt) | PP_4764 | histone deacetylase family protein |
| ? | NC_002947 | = 5424567 | 46 (1.100) | coding (118/915 nt) | PP_4764 | histone deacetylase family protein | |||||
ACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAACACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5424404‑5424553‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggtcggTGGTCAGCCCGCTGCCGACCAGGTGGTCGTGCAGCAGGCGGAACTTGTCCATCGGGAAGCGGTGTTCAGCGGGGAACTCCGGGCTGTAATCTTCGTGGTAGATCAGCGGCAACGGCATGGATGGGGTCGCAATCAGGGCCAGTGCTGA < NC_002947/5424567‑5424420 ACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAACGCCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGG > 2:808292/1‑146ACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAACACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGG < 1:808292/146‑1 ATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAACACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCAC < 1:731692/127‑1 ATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAACACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCAC > 2:731692/1‑127 CCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAACACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCGG > 1:557279/1‑123 CCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAACACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCGG < 2:557279/123‑1 CGGAGTTCCCCGCTGAACACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCGGTGGTCAGCCCGCTGCCGACCAG < 1:838052/89‑1 CGGAGTTCCCCGCTGAACACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCGGTGGTCAGCCCGCTGCCGACCAG > 2:838052/1‑89 CCCCGCTGAACACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCGGTGGTCAGCCCGCTGCCGACCAGGTGGT > 1:576562/1‑87 CCCCGCTGAACACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCGGTGGTCAGCCCGCTGCCGACCAGGTGGT < 2:576562/87‑1 GTCGGTGGTCAGCCCGCTGCCGACCAGGTGGTCGTGCAGCAGGCGGAACTTGTCCATCGGGAAGCGGTGTTCAGCGGGGAACTCCGGGCTGTAATCTTCGTGGTAGATCAGCGGCAACGGCATGGATGGGGTCGCAATCAGGGCCAGTGC > 1:428467/1‑150 GGTGGTCAGCCCGCTGCCGACCAGGTGGTCGTGCAGCAGGCGGAACTTGTCCATCGGGAAGCGGTGTTCAGCGGGGAACTCCGGGCTGTAATCTTCGTGGTAGATCAGCGGCAACGGCATGGATGGGGTCGCAATCAGGGCCAGTGCTGA < 2:716402/150‑1 GGTGGTCAGCCCGCTGCCGACCAGGTGGTCGTGCAGCAGGCGGAACTTGTCCATCGGGAAGCGGTGTTCAGCGGGGAACTCCGGGCTGTAATCTTCGTGGTAGATCAGCGGCAACGGCATGGATGGGGTCGCAATCAGGGCCAG > 1:632600/1‑144 GGTGGTCAGCCCGCTGCCGACCAGGTGGTCGTGCAGCAGGCGGAACTTGTCCATCGGGAAGCGGTGTTCAGCGGGGAACTCCGGGCTGTAATCTTCGTGGTAGATCAGCGGCAACGGCATGGATGGGGTCGCAATCAGGGCCAG < 2:632600/144‑1 ACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAACACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5424404‑5424553‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggtcggTGGTCAGCCCGCTGCCGACCAGGTGGTCGTGCAGCAGGCGGAACTTGTCCATCGGGAAGCGGTGTTCAGCGGGGAACTCCGGGCTGTAATCTTCGTGGTAGATCAGCGGCAACGGCATGGATGGGGTCGCAATCAGGGCCAGTGCTGA < NC_002947/5424567‑5424420 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |