| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5565354 = | 64 (1.420) | 3 (0.070) | 3/238 | NT | 4.7% | coding (283/972 nt) | miaA | tRNA (adenosine(37)‑N6)‑dimethylallyltransferase MiaA |
| ? | NC_002947 | 5565398 = | 60 (1.390) | coding (239/972 nt) | miaA | tRNA (adenosine(37)‑N6)‑dimethylallyltransferase MiaA | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATGGATATCGGTTCGGCCAAGCCGTCGAAAGAAGTCCTCGCTGCCCACCCGCACCGGCTGATCGACATTCTCGACCCGGCCCAGAGCTATTCCGCCGCGCAGTTCCGTGCCGACGCGCTGGAGGCCATGGCCGAGATCACCGCGCGCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5565504‑5565354‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaCGGAACTGCGCGGCGGAATAGCTCTGGGCCGGGTCGAGAATGTCGATCAGCCGGTGCGGGTGGGCAGCGAGGACTTCTTTCGACGGCTTGGCCGAACCGATATCCATGCCACGGTAGACAAGTGCCGAATCGACGCTGATCAGTTCA > NC_002947/5565398‑5565544 ATGGATATCGGTTCGGCCAAGCCGTCGAAAGAAGTCCTCGCTGCCCACCCGCACCGGCTGATCGACATTCTCGACCCGGCCCAGAGCTATTCCGCCGCGCAGTTCCGTGCCGACGCGCTGGAGGCCATGGCCGAGATCACCGCGCGCGGC > 1:4876/1‑150ATGGATATCGGTTCGGCCAAGCCGTCGAAAGAAGTCCTCGCTGCCCACCCGCACCGGCTGATCGACATTCTCGACCCGGCCCAGAGCTATTCCGCCGCGCAGTTCCGTGCCGACGCGCTGGAGGCCATGGCCGAGATCACCGCGCGCGGC > 1:611651/1‑150 GTGCCGACGCGCTGGAGGCCATGGCCGAGATCACCGCGCGCGGCACGGAACTGCGCGGCGGAATAGCTCTGGGCCGGGTCGAGAATGTCGATCAGCCGGTGCGGGTGGGCAGCGAGGACTTCTTTCGACGGCTTGGCCGAACCGATATCC > 1:598942/1‑150 TGCCGACGCGCTGGAGGCCATGGCCGAGATCACCGCGCGCGGCACGGAACTGCGCGGCGGAATAGCTCTGGGCCGGGTCGAGAATGTCGATCAGCCGGTGCGGGTGGGCAGCGAGGACTTCTTTCGACGGCTTGGCCGAACCGATAT < 1:603137/147‑1 TGCCGACGCGCTGGAGGCCATGGCCGAGATCACCGCGCGCGGCACGGAACTGCGCGGCGGAATAGCTCTGGGCCGGGTCGAGAATGTCGATCAGCCGGTGCGGGTGGGCAGCGAGGACTTCTTTCGACGGCTTGGCCGAACCGATAT > 2:603137/1‑147 GCACGGAACTGCGCGGCGGAATAGCTCTGGGCCGGGTCGAGAATGTCGATCAGCCGGTGCGGGTGGGCAGCGAGGACTTCTTTCGACGGCTTGGCCGAACCGATATCCATGCCACGGTAGACAAGTGCCGAATCGACGCTGATCAGTTCA > 2:762918/1‑150 ATGGATATCGGTTCGGCCAAGCCGTCGAAAGAAGTCCTCGCTGCCCACCCGCACCGGCTGATCGACATTCTCGACCCGGCCCAGAGCTATTCCGCCGCGCAGTTCCGTGCCGACGCGCTGGAGGCCATGGCCGAGATCACCGCGCGCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5565504‑5565354‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaCGGAACTGCGCGGCGGAATAGCTCTGGGCCGGGTCGAGAATGTCGATCAGCCGGTGCGGGTGGGCAGCGAGGACTTCTTTCGACGGCTTGGCCGAACCGATATCCATGCCACGGTAGACAAGTGCCGAATCGACGCTGATCAGTTCA > NC_002947/5565398‑5565544 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |