New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5692629 | 55 (1.220) | 5 (0.120) | 5/228 | NT | 8.7% | intergenic (+42/‑128) | PP_4994/PP_4995 | hypothetical protein/exopolysaccharide biosynthesis protein |
? | NC_002947 | = 5692669 | 55 (1.330) | intergenic (+82/‑88) | PP_4994/PP_4995 | hypothetical protein/exopolysaccharide biosynthesis protein |
CGGCTGGAGATCATCCGCACCTGGCGCTTTGCCCGTGGGGACCGTTTGTCCAGTAACTGATTTTCTGCATGTGCCGGCCTCTTCGCGGGCACGCCCGCTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5692528‑5692629 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGCACATGCAGAAAATCAGTTACTGGACAAACGGTCCCCACGGGCAAAGCGCCAGGTGCGGATGATCTCCAGCCGGTCGAAC < NC_002947/5692669‑5692521 CGGCTGGAGATCATCCGCACCTGGCGCTTTGCCCGTGGGGACCGTTTGTCCAGTAACTGATTTTCTGCATGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCGCCTATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGG < 1:521065/150‑1 GCTGGAGATCATCCGCACCTGGCGCTTTGCCCGTGGGGACCGTTTGTCCAGTAACTGATTTTCTGCATGTGCCGGCCTCTTCGCGGGCACGCC > 1:805478/1‑93 GCTGGAGATCATCCGCACCTGGCGCTTTGCCCGTGGGGACCGTTTGTCCAGTAACTGATTTTCTGCATGTGCCGGCCTCTTCGCGGGCACGCC < 2:805478/93‑1 CTGGAGATCATCCGCACCTGGCGCTTTGCCCGTGGGGACCGTTTGTCCAGTAACTGATTTTCTGCATGTGCCGGCCTCTTCGCGGGCACGCCCGCTCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCG > 2:727541/1‑150 TCCGCACCTGGCGCTTTGCCCGTGGGGACCGTTTGTCCAGTAACTGATTTTCTGCATGTGCCGGCCTCTTCGCGGGCACGCCCGCTCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCGTGCCCGCGAA < 1:727541/150‑1 TTTGCCCGTGGGGACCGTTTGTCCAGTAACTGATTTTCTGCATGTGCCGGCCTCTTCGCGGGCACGCCCGCTCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGT < 1:1065214/115‑1 TTTGCCCGTGGGGACCGTTTGTCCAGTAACTGATTTTCTGCATGTGCCGGCCTCTTCGCGGGCACGCCCGCTCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGT > 2:1065214/1‑115 CGCTCCCGCCGATACTCCACAGGCTTCATCGCCGGTGAGCAACCCGTGGGAGCGGACGTGCCCGCTAAGAGGCCGGCACATGCAGAAAATCAGTTACTTGACAAACGGTCCCCACGGGCAAAGCGGCAGGTGCGGATGATCTCCAGCCGG < 2:415776/150‑1 CGCTCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGCACATGCAGAAAATCAGTTACTGGACAAACGGTCCCCACGGGCAAAGCGCCAGGTGCGGATGATCTCCAGCCGG < 2:760492/150‑1 CCCGCCCATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGCCGTGCCCGCGAAGAGGCCGGCACATGCAGAATATCAGTTACTGGACAAACGGTCCCCACGGGCAAAGCGCCAGGTGCGGATGATCTCCAGCCGGTCGA < 1:364604/150‑1 CCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGCACATGCAGAAAATCAGTTACTGGACAAACGGTCCCCACGGGCAAAGCGCCAGGTGCGGATGATCTCCAGCCGGTCGAA > 1:960659/1‑150 CCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGCACATGCAGAAAATCAGTTACTGGACAAACGGTCCCCACGGGCAAAGCGCCAGGTGCGGATGATCTCCAGCCGGTCGAA > 2:609928/1‑150 CCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGCACATGCAGAAAATCAGTTACTGGACAAACGGTCCCCACGGGCAAAGCGCCAGGTGCGGATGATCTCCAGCCGGTCGAA > 2:892100/1‑150 CGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGCACATGCAGAAAATCAGTTACTGGACAAACGGTCCACACGGGCAAAGCGCCAGGTGCGGATGATCTCCAGCCGGTCGAAC > 1:737329/1‑150 CGGCTGGAGATCATCCGCACCTGGCGCTTTGCCCGTGGGGACCGTTTGTCCAGTAACTGATTTTCTGCATGTGCCGGCCTCTTCGCGGGCACGCCCGCTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5692528‑5692629 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGCACATGCAGAAAATCAGTTACTGGACAAACGGTCCCCACGGGCAAAGCGCCAGGTGCGGATGATCTCCAGCCGGTCGAAC < NC_002947/5692669‑5692521 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |