| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5713129 = | 55 (1.220) | 4 (0.090) | 4/240 | NT | 7.1% | coding (522/1623 nt) | ubiB | 2‑octaprenylphenol hydroxylase |
| ? | NC_002947 | 5713157 = | 52 (1.190) | coding (550/1623 nt) | ubiB | 2‑octaprenylphenol hydroxylase | |||||
AGTCTTCGAAGTTGCGCCGCAGCTGGCTGGCGTTGGCAGCCTCGCGCAGCAGGTCGAGCTCGTCGTAGATGGTTTTTTCGTAGTCGCCGACGATTTCCACCGGGTGCAGCCGACGGGCATCCGCCGAGGCGCGTTCGGCGGCCTTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5713277‑5713129‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgGATGCCCGTCGGCTGCACCCGGTGGAAATCGTCGGCGACTACGAAAAAACCATCTACGACGAGCTCGACCTGCTGCGCGAGGCTGCCAAC > NC_002947/5713157‑5713246 AGTCTTCGAAGTTGCGCCGCAGCTGGCTGGCGTTGGCAGCCTCGCGCAGCAGGTCGAGCTCGTCGTAGATGGTTTTTTCGTAGTCGCCGACGATTTCCACCGGGTGCAGCCGACGGGCATCCGCCGAGGCGCGTTCGGCGGCCTTG > 1:410609/1‑146AGTCTTCGAAGTTGCGCCGCAGCTGGCTGGCGTTGGCAGCCTCGCGCAGCAGGTCGAGCTCGTCGTAGATGGTTTTTTCGTAGTCGCCGACGATTTCCACCGGGTGCAGCCGACGGGCATCCGCCGAGGCGCGTTCGGCGGCCTTG < 2:410609/146‑1 GGGCATCCGCCGAGGCGCGTTCGGCGGCCTTGGCGGATGCCCGTCGGCTGCACCCGGTGGAAATCGTCGGCGACTACGAAAAAACCATCTACGACGAGCTCGACCTGCTGCGCGAGGCTGCCAAC < 1:341859/125‑1 GGGCATCCGCCGAGGCGCGTTCGGCGGCCTTGGCGGATGCCCGTCGGCTGCACCCGGTGGAAATCGTCGGCGACTACGAAAAAACCATCTACGACGAGCTCGACCTGCTGCGCGAGGCTGCCAAC > 2:341859/1‑125 GCCGAGGCGCGTTCGGCGGCCTTGGCGGATGCCCGTCGGCTGCACCCGGTGGAAATCGTCGGCGACTACGAAAAAA < 1:548609/76‑1 GCCGAGGCGCGTTCGGCGGCCTTGGCGGATGCCCGTCGGCTGCACCCGGTGGAAATCGTCGGCGACTACGAAAAAA > 2:548609/1‑76 AGTCTTCGAAGTTGCGCCGCAGCTGGCTGGCGTTGGCAGCCTCGCGCAGCAGGTCGAGCTCGTCGTAGATGGTTTTTTCGTAGTCGCCGACGATTTCCACCGGGTGCAGCCGACGGGCATCCGCCGAGGCGCGTTCGGCGGCCTTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5713277‑5713129‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgGATGCCCGTCGGCTGCACCCGGTGGAAATCGTCGGCGACTACGAAAAAACCATCTACGACGAGCTCGACCTGCTGCGCGAGGCTGCCAAC > NC_002947/5713157‑5713246 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |