New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5857410 =	78 (1.730)	6 (0.140)	5/240	NT	7.7%	coding (1281/1392 nt)	PP_5133	membrane protein
	?	NC_002947	5857436 =	68 (1.560)					coding (1307/1392 nt)	PP_5133	membrane protein

CCAACATTGGTATGGCCGACCACGGCCAGTTTCAGTGGCTCAGTCATGGCCATGCTCCAGCCAGGTCAGCGGTGAGGTGTCGGCATGTTGCAGGCCAAGGCGGTCAAGGGCTTCGTGCCAATCGCCCAGGCGCTCGGCATCGAGGGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5857560‑5857410 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggGCGATTGGCACGAAGCCCTTGACCGCCTTGGCCTGCAACATGCCGACACCTCACCGCTGACCTGGCTGGAGCATGGCCATGACTGAGCCACTGAAACTGGCCGTGGTCGGCCATACCAATGTTGGCAAAACCTCGCTACTGCGCACC  >  NC_002947/5857436‑5857582                                                                                                                                                                                                                                                                                                            CCAACATTGGTATGGCCGACCACGGCCAGTTTCAGTGGCTCAGTCATGGCCATGCTCCAGCCAGGTCAGCGGTGAGGTGTCGGCATGTTGCAGGCCAAGGCGGTCAAGGGCTTCGTGCCAATCGCCCAGGCGCTCGGCATCGAGGGGCTG                                                                                                                                                      >  1:1085751/1‑150                                                                                                                              CCAGGCGCTCGGCATCGAGGGGCTGGGCGATTGGCACGAAGCCCTTGACCGCCTTGGCCTGCAACATGCCGACACCTCACCGCTGACCTGGCTGGAGCATGGCCATGACTGAGCCACTGAAACTGGCCGT                                             <  1:796848/130‑1                                                                                                                              CCAGGCGCTCGGCATCGAGGGGCTGGGCGATTGGCACGAAGCCCTTGACCGCCTTGGCCTGCAACATGCCGACACCTCACCGCTGACCTGGCTGGAGCATGGCCATGACTGAGCCACTGAAACTGGCCGT                                             >  2:796848/1‑130                                                                                                                              CCAGGCGCTCGGCATCGAGGGGCTGGGCGATTGGCACGAAGCCCTTGACCGCCTTGGCCTGCAACATGCCGACACCTCACCGCTGACCTGGCTGGAGCATGG                                                                         <  1:1067627/102‑1                                                                                                                              CCAGGCGCTCGGCATCGAGGGGCTGGGCGATTGGCACGAAGCCCTTGACCGCCTTGGCCTGCAACATGCCGACACCTCACCGCTGACCTGGCTGGAGCATGG                                                                         >  2:1067627/1‑102                                                                                                                                AGGCGCTCGGCATCGAGGGGCTGGGCGATTGGCACGAAGCCCTTGACCGCCTTGG                                                                                                                      <  1:1111150/55‑1                                                                                                                                AGGCGCTCGGCATCGAGGGGCTGGGCGATTGGCACGAAGCCCTTGACCGCCTTGG                                                                                                                      >  2:1111150/1‑55                                                                                                                                                    CTGGGCGATTGGCACGAAGCCCTTGACCGCCTTGGCCTGCAACATGCCGACACCTCACCGCTGACCTGGCTGGAGCATGGCCATGACTGAGCCACTGAAACTGGCCGTGGTCGGCCATACCAATGTTGGC                       <  1:1092608/130‑1                                                                                                                                                    CTGGGCGATTGGCACGAAGCCCTTGACCGCCTTGGCCTGCAACATGCCGACACCTCACCGCTGACCTGGCTGGAGCATGGCCATGACTGAGCCACTGAAACTGGCCGTGGTCGGCCATACCAATGTTGGC                       >  2:1092608/1‑130                                                                                                                                                     TGGGCGATTGGCACGAAGCCCTTGACCGCCTTGGCCTGCAACATGCCGACACCTCACCGCTGACCTGGCTGGAGCATGGCCATGACTGAGCCACTGAAACTGGCCGTGGTCGGCCATACCAATGTTGGCAAAACCTCGCTACTGCGCACC  <  1:877111/150‑1                                                                                                                                                                                                                                                                                                            CCAACATTGGTATGGCCGACCACGGCCAGTTTCAGTGGCTCAGTCATGGCCATGCTCCAGCCAGGTCAGCGGTGAGGTGTCGGCATGTTGCAGGCCAAGGCGGTCAAGGGCTTCGTGCCAATCGCCCAGGCGCTCGGCATCGAGGGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5857560‑5857410 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggGCGATTGGCACGAAGCCCTTGACCGCCTTGGCCTGCAACATGCCGACACCTCACCGCTGACCTGGCTGGAGCATGGCCATGACTGAGCCACTGAAACTGGCCGTGGTCGGCCATACCAATGTTGGCAAAACCTCGCTACTGCGCACC  >  NC_002947/5857436‑5857582

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.