New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5893700 =	65 (1.440)	4 (0.090)	4/234	NT	6.0%	coding (826/990 nt)	cysA	sulfate/thiosulfate ABC transporter ATP‑binding protein
	?	NC_002947	5893748 =	65 (1.530)					coding (778/990 nt)	cysA	sulfate/thiosulfate ABC transporter ATP‑binding protein

GTACGATCAGCCGGCCAACGATTTCGTCTACCACTTCCTCGGTGACTCCAACCGCCTGGCCTTGAGCGAAGGGCATCACGTGCTGTTTCGCCCGCACGAGGTGTCGCTGTCGCGGCACGAGACCGAAGGGCACCATGCGGCCGAGGTGCGCGACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5893854‑5893700 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgacaGCGACACCTCGTGCGGGCGAAACAGCACGTGATGCCCTTCGCTCAAGGCCAGGCGGTTGGAGTCACCGAGGAAGTGGTAGACGAAATCGTTGGCCGGCTGATCGTACACTTCACCCGGCGAGCCGATCTGCTCGATCACGCCCTTGTTC  >  NC_002947/5893748‑5893896                                                                                                                                                                                                                                                                                                                  GTACGATCAGCCGGCCAACGATTTCGTCTACCACTTCCTCGGTGACTCCAACCGCCTGGCCTTGAGCGAAGGGCATCACGTGCTGTTTCGCCCGCACGAGGTGTCGCTGTCGCGGCACGAGACCGAAGGGCACCATGCGGCCGAGGTGCG                                                                                                                                                            >  2:881265/1‑150  TACGATCAGCCGGCCAACGATTTCGTCTACCACTTCCTCGGTGACTCCAACCGCCTGGCCTTGAGCGAAGGGCATCACGTGCTGTTTCGCCCGCACGAGGTGTCGCTGTCGCGGCACGAGACCGAAGGGCACCATGCGGCCGAGGTGCGC                                                                                                                                                           <  2:109649/150‑1                                                                                                            TGTCGCGGCACGAGACCGAAGGGCACCATGCGGCCGAGGTGCGCGACAGCGACACCTCGTGCGGGCGAAACAGCACGTGATGCCCTTCGCTCAAGGCCAGGCGGTTGGAGTCACCGAGGAAGTGG                                                                          <  1:20762/125‑1                                                                                                            TGTCGCGGCACGAGACCGAAGGGCACCATGCGGCCGAGGTGCGCGACAGCGACACCTCGTGCGGGCGAAACAGCACGTGATGCCCTTCGCTCAAGGCCAGGCGGTTGGAGTCACCGAGGAAGTGG                                                                          >  2:20762/1‑125                                                                                                              TCGCGGCACGAGACCGAAGGGCACCATGCGGCCGAGGTGCGCGACAGCGACACCTCGTGCGGGCGAAACAGCACGTGATGCCCTTCGCTCAAGGCCAGG                                                                                                  <  1:499944/99‑1                                                                                                              TCGCGGCACGAGACCGAAGGGCACCATGCGGCCGAGGTGCGCGACAGCGACACCTCGTGCGGGCGAAACAGCACGTGATGCCCTTCGCTCAAGGCCAGG                                                                                                  >  2:499944/1‑99                                                                                                                                                           AGCCACACCTCGTGCGGGCGAAACAGCACGTGATGCCCTTCGCTCAAGGCCAGGCGGTTGGAGTCACCGAGGAAGTGGTAGACGAAATCGTTGGCCGGCTGATCGTACACTTCACCCGGCGAGCCGATCTGCTCGATCACGCCCTTGTTC  <  2:473589/150‑1                                                                                                                                                                                                                                                                                                                  GTACGATCAGCCGGCCAACGATTTCGTCTACCACTTCCTCGGTGACTCCAACCGCCTGGCCTTGAGCGAAGGGCATCACGTGCTGTTTCGCCCGCACGAGGTGTCGCTGTCGCGGCACGAGACCGAAGGGCACCATGCGGCCGAGGTGCGCGACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5893854‑5893700 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgacaGCGACACCTCGTGCGGGCGAAACAGCACGTGATGCCCTTCGCTCAAGGCCAGGCGGTTGGAGTCACCGAGGAAGTGGTAGACGAAATCGTTGGCCGGCTGATCGTACACTTCACCCGGCGAGCCGATCTGCTCGATCACGCCCTTGTTC  >  NC_002947/5893748‑5893896

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.