| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6077877 = | 52 (1.150) | 5 (0.140) | 5/200 | NT | 10.2% | intergenic (‑123/+115) | PP_5329/PP_5330 | phosphate ABC transporter substrate‑binding protein/MFS transporter |
| ? | NC_002947 | 6077977 = | 46 (1.260) | intergenic (‑223/+15) | PP_5329/PP_5330 | phosphate ABC transporter substrate‑binding protein/MFS transporter | |||||
AGGCCTGTGCGCCGTCGGTCTAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6078049‑6077877‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctttagccgcgaagaggccagTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCGCCAAAGA > NC_002947/6077977‑6078125 cGGCCTGTGCGCCGTCGGGCTAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAAC < 1:238261/149‑1 CGCCGTCGGTCTAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGC < 1:282072/150‑1 TCGGTCTAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAAGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGA > 1:499021/1‑150 GGTCTAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAG > 2:702042/1‑150 TCTAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAG > 2:977805/1‑150 TCTAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAG < 2:793173/150‑1 TCTAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAG > 1:313413/1‑150 TAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGC > 2:40736/1‑150 GCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCA < 2:643617/129‑1 GCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCA > 1:643617/1‑129 TCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCT > 1:1129545/1‑96 TCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCT < 2:1129545/96‑1 GGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCA < 1:985891/104‑1 GGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCA > 2:985891/1‑104 TACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAG < 1:727301/97‑1 TACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAG > 2:727301/1‑97 AAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGC < 2:341086/80‑1 AAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGC > 1:341086/1‑80 AAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGA < 2:217297/137‑1 AAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGA > 1:217297/1‑137 TCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCT > 1:1033313/1‑148 TCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCT < 2:1033313/148‑1 TACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCAC > 1:474904/1‑150 GCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGCGGTCACCACCA > 2:331671/1‑150 CTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGCGCGGTCACCACCAT < 1:1111220/150‑1 AGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGC < 2:474904/150‑1 AGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGC < 1:331671/150‑1 AGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGC > 2:119211/1‑119 AGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGC < 1:119211/119‑1 GTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCGCCAAAGA < 1:793173/150‑1 AGGCCTGTGCGCCGTCGGTCTAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6078049‑6077877‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctttagccgcgaagaggccagTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCGCCAAAGA > NC_002947/6077977‑6078125 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |