New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2115099	44 (0.980)	3 (0.070)	3/230	NT	6.2%	coding (576/1806 nt)	PP_1883	hypothetical protein
	?	NC_002947	= 2115121	50 (1.190)					coding (598/1806 nt)	PP_1883	hypothetical protein

ATTGCTGGCAACAGCGCCCTATGCCGCCATGGCCAAAGATGACAAGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTCGCCGATGGCACCAGCAGCCGGTCGCCAGTGCAGCGCTTCGACATCGTTTCGCCCGCCGCCGGCGAC  >  NC_002947/2114961‑2115246                                                                                                                                           |                                                                                                                                                     atTGCTGGCAACAGCGCCCTATGCCGCCATGGCCAAAGATGACAAGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTCGCGCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCt‑gtg                                                                                                                                          >  1:617102/1‑150 (MQ=255)      tGGCAACAGCGCCCTATGCCGCCATGGCCAAAGATGACAAGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGACGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCAcc                                                                                                                                     >  1:885605/1‑150 (MQ=255)       ggCAACAGCGCCCTATGCCGCCATGGCCAAAGATGACAAGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCt                                                                                                                                    <  2:851969/150‑1 (MQ=255)       ggCAACAGCGCCCTATGCCGCCATGGCCAAAGATGACAAGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCt                                                                                                                                    >  2:666724/1‑150 (MQ=255)              gcgcCCTATGCCGCCATGGCCAAAGATGACAAGGTTTTCCTGAGTTGGGAGCCCTTGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATAtc                                                                                                                             <  2:681899‑M2/150‑3 (MQ=255)               cgcCCTATGCCGCCATGGCCAAAGATGACAAGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATAtcg                                                                                                                            >  2:452008‑M2/1‑147 (MQ=255)                gcCCTATGCCGCCATGGCCAAAGATGACAAGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATAtcgg                                                                                                                           <  1:312037‑M2/150‑5 (MQ=255)                        ccgccATGGCCAAAGATGACAAGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCt                                                                                                                   >  1:760279/1‑150 (MQ=255)                         cgccATGGCCAAAGATGACAAGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTTCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCGGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCtt                                                                                                                  >  1:849742/1‑150 (MQ=255)                         cgccATGGCCAAAGATGACAAGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCtt                                                                                                                  <  1:780986/150‑1 (MQ=255)                          gccATGGCCAAAGATGACAAGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTc                                                                                                                 <  1:402117/150‑1 (MQ=255)                                gCCAAAGATGACAAGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGAtatccaggtgccacatcagtggtcggccaggatcagactcct                                                                                                            <  2:14797‑M1/150‑43 (MQ=255)                                gCCAAAGATGACAAGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCATTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTAt                                                                                                           >  2:869605/1‑150 (MQ=255)                                 ccAAAGATGACAAGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTAtc                                                                                                          >  1:441293/1‑150 (MQ=255)                                   aaaGATGACAAGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTAtctc                                                                                                        >  2:468959/1‑150 (MQ=255)                                   aaaGATGACAAGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTAtctc                                                                                                        <  2:320218/150‑1 (MQ=255)                                    aaGATGACAAGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTcg                                                                                                       <  2:760279/150‑1 (MQ=255)                                            aaGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTc                                                                                               <  2:684207/150‑1 (MQ=255)                                            aaGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTc                                                                                               >  2:113467/1‑150 (MQ=255)                                              ggTTTTCCTGAGTTGGGAGCCCTGGGTTAACGAGTCCTGGCCAGGTGTGCCGTTCGAGCAAGTACTGGGAGTGCAGGAGGCTGATCCTGGGCGACCACTGCT‑GTGGCACCTGGGTATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGc                                                                                             <  2:441293/150‑1 (MQ=255)                                              ggTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGAATGTGCGTCG‑AGAGATCTGGTCGTTTCGCCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGc                                                                                             >  1:142219/1‑150 (MQ=255)                                                     cTGATTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTg                                                                                      >  2:600559/1‑150 (MQ=255)                                                      tGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGc                                                                                     >  1:1095256/1‑150 (MQ=255)                                                       gAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCa                                                                                    <  1:93759/150‑1 (MQ=255)                                                                  ccTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTcggcgg                                                                                                   >  2:580011/1‑124 (MQ=255)                                                                  ccTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTcggcgg                                                                                                   <  1:580011/124‑1 (MQ=255)                                                                   cTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGa                                                                        >  1:1069613/1‑150 (MQ=255)                                                                   cTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGa                                                                        >  2:361539/1‑150 (MQ=255)                                                                       cTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTc                                                                    <  1:342674/150‑1 (MQ=255)                                                                        tCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTCg                                                                   >  2:1153617/1‑150 (MQ=255)                                                                        tCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGGCTGCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTCg                                                                   >  1:264929/1‑150 (MQ=255)                                                                         cAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTCGc                                                                  <  1:754213/150‑1 (MQ=255)                                                                                  cTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTCGCCGATGGCAc                                                         >  1:910863/1‑150 (MQ=255)                                                                                    tGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTCGCCGATGGCACca                                                       <  1:666724/150‑1 (MQ=255)                                                                                     gCCAGGTGTGCCGTTCGAGCCAGTACTGGCACTCAAGGACTCTGAGCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTCGCCGATGGCACcag                                                      <  1:269456/150‑1 (MQ=255)                                                                                              gCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATACTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTCGCCGATGGCACCAGCAGCCGGTc                                             >  1:975614/1‑150 (MQ=255)                                                                                                cGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCCCTATCTCATCTAGTTCACCGAGGTCACCAGCAGCCGGTCGc                                           <  2:617102/150‑1 (MQ=255)                                                                                                             aCTGGAAGTGCAGGAGTCTGATCCTGGCCGGtatccaggtgccacagcagtggtcggccaggatcaga                                                                                                                 <  1:984161‑M1/68‑38 (MQ=255)                                                                                                             aCTGGAAGTGCAGGAGTCTGATCCTGGCCGAtatccaggtgccacagcagtggtcggccaggatcaga                                                                                                                 >  2:984161‑M1/1‑31 (MQ=255)                                                                                                                ggAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTCGCCGATGGCACCAGCAGCCGGTCGCCAGTGCAGCGCTTCGa                           >  2:881619/1‑150 (MQ=255)                                                                                                                 gAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTCGCCGATGGCACCAGCAGCCGGTCGcc                                          <  2:907052/134‑1 (MQ=255)                                                                                                                 gAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTCGCCGATGGCACCAGCAGCCGGTCGcc                                          >  1:907052/1‑134 (MQ=255)                                                                                                                      gCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTCGCCGATGGCACCAGCAGCCGGTCGCCAGTGCAGCGCTTCGACATCGt                     >  2:1108895/1‑150 (MQ=255)                                                                                                                      gCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTCGCCGATGGCACCAGCAGCCGGTCGCCAGTGCAGCGCTTCGACATCGt                     <  2:849742/150‑1 (MQ=255)                                                                                                                       cAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTCGCCGATGGCACCAGCAGCCGGTCGCCAGTGCAGCGCTTCGACATCGtt                    <  2:1069613/150‑1 (MQ=255)                                                                                                                        aGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGaa                                                                       <  2:40680/98‑1 (MQ=255)                                                                                                                        aGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGaa                                                                       >  1:40680/1‑98 (MQ=255)                                                                                                                        aGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCGGGAGATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTCGCCGATGGCACCAGCAGCCGGTCGCCAGTGCAGCGCTTCGACATCGttt                   <  2:885605/150‑1 (MQ=255)                                                                                                                        aGGAGTCTGATCCTGGCCGACCACTGAT‑GTGGCACCTGGATAtcggccaggatcagactcctgcacttccagtacttgctcgaacggcacacctggcaaggactcgttgagccagggctcccaactcaggaaaaccttgtcatctttggc                   <  2:14797‑M2/150‑109 (MQ=255)                                                                                                                             tCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATAtcggccaggatcagactcctgcacttccagt                                                                                                >  2:984161‑M2/1‑37 (MQ=255)                                                                                                                             tCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATAccggccaggatcagactcctgcacttccagt                                                                                                <  1:984161‑M2/68‑32 (MQ=255)                                                                                                                                 aTCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTCGCCg                                                                >  1:259068/1‑96 (MQ=255)                                                                                                                                 aTCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTCGCCg                                                                <  2:259068/96‑1 (MQ=255)                                                                                                                                        ccGAtatccaggtgccacagcagtggtcggccaggatcagactcctgcacttccagtacttgctcgaacggcacacctggcaaggactcgttgagccagggctcccaactcaggaaaaccttgtcatctttggccatggcggcatagggc    <  1:312037‑M1/150‑147 (MQ=255)                                                                                                                                        ccGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTCGCCGATGGCACCAGCAGCCGGTCGCCAGTGCAGCGCTTCGACATCGTTTCGCCCGCCGCCGGCGa   <  1:681899/150‑1 (MQ=255)                                                                                                                                        ccGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTCGCCGATGGCACCAGCAGCCGGTCGCCAGTGCAGCGCTTCGACATCGTTTCGCCCGCCGCCGGCGa   >  2:271334/1‑150 (MQ=255)                                                                                                                                         cGAtatccaggtgccacagcagtggtcggccaggatcagactcctgcacttccagtacttgctcgaacggcacacctggcaaggactcgttgagccagggctcccaactcaggaaaaccttgtcatctttggccatggcggcatagggcg   >  2:452008‑M1/1‑3 (MQ=255)                                                                                                                                          gAtatccaggtgccacagcagtggtcggccaggatcagactcctgcacttccagtacttgctcgaacggcacacctggcaaggactcgttgagcaagggctcccaactcaggaaaaccttgtcatctttggccatggcggcatagggcgc  <  2:681899‑M1/150‑149 (MQ=255)                                                                                                                                           |                                                                                                                                                     ATTGCTGGCAACAGCGCCCTATGCCGCCATGGCCAAAGATGACAAGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGACCACTGCT‑GTGGCACCTGGATATCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTCGCCGATGGCACCAGCAGCCGGTCGCCAGTGCAGCGCTTCGACATCGTTTCGCCCGCCGCCGGCGAC  >  NC_002947/2114961‑2115246

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.