New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 907509	37 (0.820)	5 (0.110)	5/240	NT	11.9%	coding (705/777 nt)	yjjV	putative hydrolase
	?	NC_002947	= 907520	38 (0.870)					coding (694/777 nt)	yjjV	putative hydrolase

CCGTGCTGGTCTGATTCGGGGCCAATCGCATCCCACGCGAATCCCGGTCACCCGAGCTTCACCAGCCGAACAACGTGCAAGCATTGCGGGTGCTGGCCTGTGCCAGCACCTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGTACATCGCCGGTGCCATGTCCGGTGAGTCAGTCTCCAGCACCACACTTTCCAGTGGCAGCCGCGCCAAGGTCTTGCGCAGCCGCAGCGCCTGCGGCCAGGT  >  NC_002947/907379‑907667                                                                                                                                              |                                                                                                                                                    ccGTGCTGGTCTGATTCGGGGCCAATCGCATCCCACGCGAATCCCGGTCACCCGAGCTTCACCAGCCGAACAACGTGCAAGCATTGCGGGTGCTGGCCTGTGCCAGCACCTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCaa                                                                                                                                             <  2:284568/150‑1 (MQ=255)      cTGGTCTGATTCGGGGCCAATCGCATCCCACGTGAATCCCGGTCACCCGAGCTTCACCAGCCGAACAACGTGCAAGCATTGCGGGTGCTGGCCTGTGCCAGCACCTCGACATCCAGCCCCATCACG‑GCGCTTGCGCacgtgatggggctg                                                                                                                                       >  2:110016‑M2/1‑136 (MQ=255)      cTGGTCTGATTCGGGGCCAATCGCATCCCACGCGAATCCCGGTCACCCGAGCTTCACCAGCCGAACAACGTGCAAGCATTGCGGGTGCTGGCCTGTGCCAGCACCTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTcc                                                                                                                                        <  2:371469/150‑1 (MQ=255)          tCTGATTCGGGGCCAATCGCATCCCACGCGAATCCCGGTCACCCGAGCTTCACCAGCCGAACAACGTGCAAGCATTGCGGGTGCTGGCCTGTGCCAGCACCTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCa                                                                                                                                    <  1:354733/150‑1 (MQ=255)           cTGATTCGGGGCCAATCGCATCCCACGCGAATCCCGGTCACCCGAGCTTCACCAGCCGAACAACGTGCAAGCATTGCGGGTGCTGGCCTGTGCCAGCACCTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAg                                                                                                                                   <  1:249043/150‑1 (MQ=255)                     gCCAATCGCATCCCACGCGAATCCCGGTCACCCTAGCTTCACCAGCCGAACAACGTGCAAGCATTGCGGGTGCTGGCCTGTGCCAGCACCTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCggg                                                                                                                         >  1:55615/1‑150 (MQ=255)                       cAATCGCATCCCACGCGAATCCCGGTCACCCGAGCTTCACCAGCCGAACAACGTGCAAGCATTGCGGGTGCTGGCCTGTGCCAGCACCTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCt                                                                                                                       <  2:978308/150‑1 (MQ=255)                        aaTCGCATCCCACGCGAATCCCGGTCACCCGAGCTTCACCAGCCGAACAACGTGCAAGCATTGCGGGTGCTGGCCTGTGCCAGCACCTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTg                                                                                                                      >  1:59153/1‑150 (MQ=255)                          tCGCATCCCACGCGAATCCCGGTCACCCGAGCTTCACCAGCCGAACAACGTGCAAGCATTGCGGGTGCTGGCCTGTGCCAGCACCTCGACATCCAGCCCCATCACG‑GCGCTTGCGCacgtgatggggctggatgtcgagg                                                                                                                             >  1:377370‑M2/1‑116 (MQ=255)                          tCGCATCCCACGCGAATCCCGGTCACCCGAGCTTCACCAGCCGAACAACGTGCAAGCATTGCGGGTGCTGGCCTGTGCCAGCACCTCGACATCCAGCCCCATCACG‑GCGCTTGCGCacgtgatggggctggatgtcgagg                                                                                                                             <  2:377370‑M2/140‑25 (MQ=255)                                       gAATCCCGGTCACCCGAGCTTCACCAGCCGAACAACGTGCAAGCATTGCGGGTGCTGGCCTGTGCCAGCACCTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCggg                                                                                                       >  2:266440/1‑150 (MQ=255)                                        aaTCCCGGTCACCCGAGCTTCACCAGCCGAACAACGTGCAAGCATTGCGGGTGCTGGCCTGTGCCAGCACCTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGt                                                                                                      <  1:266440/150‑1 (MQ=255)                                           cccGGTCACCCGAGCTTCACCAGCCGAACAACGTGCAAGCATTGCGGGTGCTGGGCTGTTCCAGCACCTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGCCTGTTGCGTACCCCCGGGTACa                                                                                                   >  2:848312/1‑150 (MQ=255)                                                  aCCCGAGCTTCACCAGCCGAACAACGTGCAAGCATTGCGGGTGCTGGCCTGTGCCAGCACCTCGACATCCAGCCCCATCACG‑GCGCTTGCGCacgtgatggggctggatgtcgag                                                                                                                              <  1:753967‑M2/115‑24 (MQ=255)                                                  aCCCGAGCTTCACCAGCCGAACAACGTGCAAGCATTGCGGGTGCTGGCCTGTGCCAGCACCTCGACATCCAGCCCCATCACG‑GCGCTTGCGCacgtgatggggctggatgtcgag                                                                                                                              >  2:753967‑M2/1‑92 (MQ=255)                                                     cGAGCTTCACCAGCCGAACAACGTGCAAGCATTGCGGGTGCTGGCCTGTGCCAGCACCTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGTACATCGCCGGTGc                                                                                         >  1:1161636/1‑150 (MQ=255)                                                      gAGCTTCACCAGCCGAACAACGTGCAAGCATTGCGGGTGCTGGCCTGTGCCAGCACCTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTCGCAATTTCCAGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGTACATCGCCGGTGcc                                                                                        <  1:405155/150‑1 (MQ=255)                                                                 gCCGAACAACGTGCAAGCATTGAGGGTGCTGGCCTGTGCCAGCACCTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGTACATCGCCGGTGCCATGTCCGGTGa                                                                             <  2:580212/150‑1 (MQ=255)                                                                            tGCAAGCATTGCGGGTGCTGGCCTGTGCCAGCACCTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGTACATCGCCGGTGCCATGTCCGGTGAGTCAGTCTCCa                                                                  >  2:917315/1‑150 (MQ=255)                                                                            tGCAAGCATTGCGGGTGCTGGCCTGTGCCAGCACCTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGTACATCGCCGGTGCCATGTCCGGTGAGTCAGTCTCCa                                                                  <  2:1014112/150‑1 (MQ=255)                                                                                  cATTTCGAGTGCTGTCCTGTGCCAGCACCTTGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGTACATCGCCGGTGCCATGTCCGGTGAGTCAGTCTCCAGcacca                                                            <  2:1161636/150‑1 (MQ=255)                                                                                     tGCGGGTGCTGGCCTGTGCCAGCACCTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGTACATCGCCGGTGCCATGTCCGGTGAGTCAGTCTCCAGcaccac                                                           >  1:75708/1‑148 (MQ=255)                                                                                     tGCGGGTGCTGGCCTGTGCCAGCACCTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGTACATCGCCGGTGCCATGTCCGGTGAGTCAGTCTCCAGcaccac                                                           <  2:75708/148‑1 (MQ=255)                                                                                        gggTGCTGGCCTGTGCCAGCACCTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGTACATCGCCGGTGCCATGTCCGGTGAGTCAGTCTCCAGCACCACACttt                                                      >  2:455134/1‑150 (MQ=255)                                                                                         ggTGCTGGCCTGTGCCAGCACCTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGTACATCGCCGGTGCCATGTCCGGTGagtca                                                                         <  1:809170/130‑1 (MQ=255)                                                                                         ggTGCTGGCCTGTGCCAGCACCTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGTACATCGCCGGTGCCATGTCCGGTGagtca                                                                         >  2:809170/1‑130 (MQ=255)                                                                                         ggTGCTGGCCTGTGCCAGCACCTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGATAAGAAGGATGGCGTACCCCCGGGTACATCGCCGGTGCCATGTCCGGTGAGTCAGTCTCCAGCACCACACTTTc                                                     >  1:980186/1‑150 (MQ=255)                                                                                                        cAGCACCTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGtt                                                                                                                    <  1:554859/72‑1 (MQ=255)                                                                                                        cAGCACCTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGtt                                                                                                                    >  2:554859/1‑72 (MQ=255)                                                                                                        cAGCACCTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGTACATCGCCGGTGCCATGTCCGGTGagt                                                                           <  1:1001636/113‑1 (MQ=255)                                                                                                        cAGCACCTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGTACATCGCCGGTGCCATGTCCGGTGagt                                                                           >  2:1001636/1‑113 (MQ=255)                                                                                                           cACCTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGTACATCGCCGGTGCCATGTCCGGTGAGTCAGTCTCCAGCACCACACTTTCCAGTGGCAGCCGCGCCaa                                   <  1:917315/150‑1 (MQ=255)                                                                                                            aCCTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGTACATCGCCGGTGCCATGTCCGGTGAGTCAGTCTCCAGCACCACACTTTCCAGTGGCAGCCGCGCCAAg                                  >  2:487943/1‑150 (MQ=255)                                                                                                             ccTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGTACATCGCCGGTGCCATGTCCGGTGAGTCAGTCTCCAGCACCACACTTTCCAGTGGCAGCCGCGCCAAgg                                 >  2:587647/1‑150 (MQ=255)                                                                                                                  aCATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGTACATCGCCGGTGCCATGTCCGGTGAGTCAGTCTCCAGCACCACACTTTCCAGTGGCAGCCGCGCCAAGGTCTTg                            <  1:455134/150‑1 (MQ=255)                                                                                                                      ccAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGTACATCGCCGGTGCCATGTCCGGTGAGTCAGTCTCCAGCACCACACTTTCCAGTGGCAGCCGCGCCAAGGTCTTgc                           <  2:117509/147‑1 (MQ=255)                                                                                                                      ccAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGTACATCGCCGGTGCCATGTCCGGTGAGTCAGTCTCCAGCACCACACTTTCCAGTGGCAGCCGCGCCAAGGTCTTgc                           >  1:117509/1‑147 (MQ=255)                                                                                                                        aGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGTACATCGCCGGTGCCATGTCCGGTGAGTCAGTCTCCAGCACCACACTTTCCAGTGGCAGCCGCGCCAAGGTCTTGcgcagc                      <  2:980186/150‑1 (MQ=255)                                                                                                                        aGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGTACATCGCCGGTGCCATGTCCGGTGAGTCAGTCTCCAGCACCACACTTTCCAGTGGCAGCCGCGCCAAGGTCTTGcgcagc                      >  1:765039/1‑150 (MQ=255)                                                                                                                          ccccATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGTACATCGCCGGTGCCATGTCCGGTGAGTCAGTCTCCAGCACCACACTTTCCAGTGGCAGCCGCGCCAAGGTCTTAcgcacccg                    >  2:130248/1‑150 (MQ=255)                                                                                                                              aTCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGTACATCGCCGGTGCCATGTCCGGTGAGTCAGTCTCCAGCACCACACTTTCCAGTGGCAGCCGCGCGAAGGTCTTGcgcagccgcagc                >  2:619862/1‑150 (MQ=255)                                                                                                                                       gcAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGTACATCGCCGGTGCCATGTCCGGTGAGTCAGTCTCCAGCACCACACTTTCCAGTGGCAGCCGCGCCAAGGTCTTGCGCAGCCGCAGCGCCTGCGGc       >  1:1147493/1‑150 (MQ=255)                                                                                                                                         aaGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGTACATCGCCGGTGCCATGTCCGGTGAGTCAGTCTCCAGCACCACACTTTCCAGTg                                                <  2:458809/107‑1 (MQ=255)                                                                                                                                         aaGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGTACATCGCCGGTGCCATGTCCGGTGAGTCAGTCTCCAGCACCACACTTTCCAGTg                                                >  1:458809/1‑107 (MQ=255)                                                                                                                                            cgcCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGTACATCGCCGGTGCCATGTCCGGTGAGTCAGTCTCCAGCACCACACTTTCCAGTGGCAGCCGCGCCAAGGTCTTGCGCAGCCGCAGCGCCTGCGGCCAGGt  <  1:587647/150‑1 (MQ=255)                                                                                                                                              |                                                                                                                                                    CCGTGCTGGTCTGATTCGGGGCCAATCGCATCCCACGCGAATCCCGGTCACCCGAGCTTCACCAGCCGAACAACGTGCAAGCATTGCGGGTGCTGGCCTGTGCCAGCACCTCGACATCCAGCCCCATCACGTGCGCAAGCGCCGTGGCAATTTCCGGCAGATGCTCCGGGCTGTTGCGTACCCCCGGGTACATCGCCGGTGCCATGTCCGGTGAGTCAGTCTCCAGCACCACACTTTCCAGTGGCAGCCGCGCCAAGGTCTTGCGCAGCCGCAGCGCCTGCGGCCAGGT  >  NC_002947/907379‑907667

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.