New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1079313	54 (1.200)	6 (0.140)	6/240	NT	10.5%	coding (503/1458 nt)	rng	endoribonuclease G
	?	NC_002947	= 1079330	50 (1.140)					coding (520/1458 nt)	rng	endoribonuclease G

CACGCAGCAGCCATGTCGGTATTTCGCTGAAAATCGAGGACGAAGCCGAGCGTGAGCGCCTCAAGCAAGTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTACCTGCGCCGCCTGTGGGAGCAGATTGGCACCCAGATCAAGACCTGCGGCGCGCCCACGGTCATTTACGAAGACCTTGGCCTGGCCCTGCGTACCCTGCGCGACCTGGTCAACCCGAA  >  NC_002947/1079184‑1079478                                                                                                                                                   |                                                                                                                                                     cACGCAGCAGCCATGTCGGTATTTCGCTGAAAATCGAGGACGAAGCCGAGCGTGAGCGCCTCAAGCAAGTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCgtg                                                                                                                                                   >  2:174787‑M2/1‑147 (MQ=255)        cagcCATGTCGGTATTTCGCTGAAAATCGAGGACGAAGCCGAGCGTGAGCGCCTCAAGCAAGTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCgagga                                                                                                                                            <  1:629640/150‑1 (MQ=255)             aTGTCGGTATTTCGCTGAAAATCGAGGACGAAGCCGAGCGTGAGCGCCTCAAGCAAGTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCt                                                                                                                                       >  2:343430/1‑150 (MQ=255)              tGTCGGTATTTCGCTGAAAATCGAGGACGAAGCCGAGCGTGAGCGCCTCAAGCAAGTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCtt                                                                                                                                      <  2:1101650/150‑1 (MQ=255)               gTCGGTATTTCGCTGAAAATCGAGGACGAAGCCGAGCGTGAGCGCCTCAAGCAAGTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTg                                                                                                                                     <  2:1172983/150‑1 (MQ=255)                tCGGTATTTCGCTGAAAATCGAGGACGAAGCCGAGCGTGAGCGCCTCAAGCAAGTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGc                                                                                                                                    <  1:861932/150‑1 (MQ=255)                tCGGTATTTCGCTGAAAATCGAGGACGAAGCCGAGCGTGAGCGCCTCAAGCAAGTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGc                                                                                                                                    >  2:861932/1‑150 (MQ=255)                 ctgTATTTCGCTGAAAATCGAGGACGAAGCCGAGCGTGAGCGCCTCAAGCAAGTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGc                                                                                                                                    <  2:114163/147‑1 (MQ=255)                 cGGTATTTCGCTGAAAATCGAGGACGAAGCCGAGCGTGAGCGCCTCAAGCAAGTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGc                                                                                                                                    >  1:114163/1‑149 (MQ=255)                 cGGTATTTCGCTGAAAATCGAGGACGAAGCCGAGCGTGAGCGCCTCAAGCAAGTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCa                                                                                                                                   <  1:561769/150‑1 (MQ=255)                         cGCTGAAAATCGAGGACGAAGCCGAGCGTGAGCGCCTCAAGCAAGTGGTCAGCGACTGCATGGATGGCGAAGACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATcc                                                                                                                           <  1:879783/150‑1 (MQ=255)                         cGCTGAAAATCGAGGACGAAGCCGAGCGTGAGCGCCTCAAGCAAGTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATcc                                                                                                                           <  1:731262/150‑1 (MQ=255)                         cGCTGAAAATCGAGGACGAAGCCGAGCGTGAGCGCCTCAAGCAAGTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATcc                                                                                                                           <  1:279185/150‑1 (MQ=255)                         cGCTGAAAATCGAGGACGAAGCCGAGCGTGAGCGCCTCAAGCAAGTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATcc                                                                                                                           <  1:1067973/150‑1 (MQ=255)                                aaTCGGGAACGAAGCCTAGCGTGATCGCCTCAAGCAAGTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGACGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTACCt                                                                                                                    <  2:373086/150‑1 (MQ=255)                                aaTCGAGGACGAAGCCGAGCGTGAGCGCCTCAAGCAAGTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTACCt                                                                                                                    <  1:1176557/150‑1 (MQ=255)                                       gACGAAGCCGAGCGTGAGCGCCTCAAGCAAGTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGa                                                                                                                                >  2:889940/1‑131 (MQ=255)                                       gACGAAGCCGAGCGTGAGCGCCTCAAGCAAGTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGa                                                                                                                                <  1:889940/131‑1 (MQ=255)                                       gACGAAGCCGAGCGTGAGCGCCTCAAGCAAGTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTACCTGcgccgc                                                                                                             >  2:364546/1‑150 (MQ=255)                                         cGAAGCCGAGCGTGAGCGCCTCAAGCAAGTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTACCTGCGCCGCCt                                                                                                           <  1:419136/150‑1 (MQ=255)                                            aGCCGAGCGTGAGCGCCTCAAGCAAGTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTACCTGCGCCGCCtgtg                                                                                                        <  2:271670/150‑1 (MQ=255)                                            aGCCGAGCGTGAGCGCCTCAAGCAAGTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTACCTGCGCCGCCtgtg                                                                                                        <  2:271753/150‑1 (MQ=255)                                             gCCGAGCGTGAGCGCCTCAAGCAAGTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTACCTGCGCCGCCTGTgg                                                                                                       >  1:1110456/1‑150 (MQ=255)                                               cGAGCGTGAGCGCCTCAAGCAAGTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCCCCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTACCTGCGCCGCCTGTGGGa                                                                                                     <  1:656394/150‑1 (MQ=255)                                                      gAGCGCCTCAAGCAAGTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTACCTGCGCCGCCTGTGGGAGCAGAtt                                                                                              <  1:364546/150‑1 (MQ=255)                                                           ccTCAAGCAAGTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTACCTGCGCCGCCTGTGGGAGCAGATTGGCAc                                                                                         <  1:343430/150‑1 (MQ=255)                                                            cTCAAGCACGTGGTCAGCGACTGCATGGATGGCGAACACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTACCTGCGCCGCCTGTGGGAGCAGATTGGCAcc                                                                                        >  2:893998/1‑150 (MQ=255)                                                            cTCAAGCAAGTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTACCTGCGCCGCCTGTGGGAGCAGATTGGCAcc                                                                                        >  1:470952/1‑150 (MQ=255)                                                              caagcaagTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTACCTGCGCCGCCTGTGGGAGCAGATTGGCACCCa                                                                                      <  2:470952/150‑1 (MQ=255)                                                                     gTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTACCTGCGCCGCCTGTGGGAGCAGATTGGCACCCAGATCAAg                                                                               >  1:1162661/1‑150 (MQ=255)                                                                                cTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTAcc                                                                                                                     >  2:279895/1‑101 (MQ=255)                                                                                cTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTAcc                                                                                                                     <  1:279895/101‑1 (MQ=255)                                                                                cTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTACCTGCGCCGCCTGTGGGAGCAGATTGGCACCCAGATCAAGACCTGCGgcgc                                                                    <  2:878605/150‑1 (MQ=255)                                                                                     tggatggCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTg                                                                                                                                     <  1:508951/80‑1 (MQ=255)                                                                                     tggatggCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTg                                                                                                                                     >  2:508951/1‑80 (MQ=255)                                                                                        atggCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTACCTGCGCCGCCTGTGGGAGCAGATTGGCACCCAGATCAAGACCTGCGGCGCGCCCACgg                                                            <  2:88044/150‑1 (MQ=255)                                                                                            cGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAg                                                                                                                                  <  1:251585/76‑1 (MQ=255)                                                                                            cGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAg                                                                                                                                  >  2:251585/1‑76 (MQ=255)                                                                                            cGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTACCTGCGCCGCCTGTGGGAGCAGATTGGCACCCAGATCAAGACCTGCGGCGCGCCCACGGTCAt                                                        <  1:158951/150‑1 (MQ=255)                                                                                            cGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTACCTGCGCCGCCTGTGGGAGCAGATTGGCACCCAGATCAAGACCTGCGGCGCGCCCACGGTCAt                                                        >  2:158951/1‑150 (MQ=255)                                                                                             gAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTCCCTGCGCCGCCTGTGGCAGCAGATTGGCACCCAGATCAAGACCTGGGGCGCGCCCACGGTCAtt                                                       <  2:12684/150‑1 (MQ=255)                                                                                              aaaaCATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTACCTGCGCCGCCTGTGGGAGCAGATTGGCACCCAGATCAAGACCTGCGGCGCGCCCACGGTCAttt                                                      >  1:1164154/1‑150 (MQ=255)                                                                                                 aCATCAAGGATGCCGGCGGCTTCATCTTGCGCACGGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTACCTGCGCCGCCTGTGGGAGCAGATTGGCACCCAGATCAAGACCTGCGGCGCGCCCACGGTCATTTACg                                                   >  2:661144/1‑150 (MQ=255)                                                                                                   aTCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTACCTGCGCCGCCTGTGGGAGCAGATTGGCACCCAGATCAAGACCTGCGGCGCGCCCACGGTCATTTACGaa                                                 >  2:1183065/1‑150 (MQ=255)                                                                                                   aTCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTACCTGCGCCGCCTGTGGGAGCAGATTGGCACCCAGATCAAGACCTGCGGCGCGCCCACGGGCATTTACGaa                                                 >  1:548248/1‑150 (MQ=255)                                                                                                         gATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTACCTGCGCCGCCTGTGGGAGCAGATTGGCACCCAGATCAAGACCTGCGGCGCGCCCACGGTCATTTACGAAGACCtt                                           <  1:1183065/150‑1 (MQ=255)                                                                                                             ccGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTACCTGCGCCGCCTGTGGGAGCAGATTGGCACCCAGATCAAGACCTGCGGCGCGCCCACGGTCATTTACGAAGACCTtggcc                                       >  1:865880/1‑150 (MQ=255)                                                                                                                    cTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTACCTGCGCCGCCTGTGGGAGCAGATTGGCACCCAGATCAAGACCTGCGGCGCGCCCACGGTCATTTACGAAGACCTTGGCCTGGCCCt                                >  2:77096/1‑150 (MQ=255)                                                                                                                     ttCATCTTGCGCACCGCCGCCGAAGGCGCGCgtgcgcaagatgaagccgccggcatccttgatgttttcgccatccatgcagtcgctgaccacttgcttgag                                                                               <  1:1036175‑M2/102‑72 (MQ=255)                                                                                                                     ttCATCTTGCGCACCGCCGCCGAAGGCGCGCgtgcgcaagatgaagccgccggcatccttgatgttttcgccatccatgcagtcgctgaccacttgcttgag                                                                               >  2:1036175‑M2/1‑31 (MQ=255)                                                                                                                      tCATCTTGCGCACCGCCGTTGTAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTCCCTGCGCCGACCGCGGGTGCAATTTGGCACCCTGACCAATACCTGCGGCGCGCCCACGGTCATTTACGAAGACCTTGGCCTGGCCCTGc                              <  1:968195/150‑1 (MQ=255)                                                                                                                        aTCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTACCTGCGCCGCCTGTGGGAGCAGATTGGCACCCAGATCAAGACCTGCGGCGCGCCCACGGTCATTTACGAAGACCTTGGCCTGGCCCTGCGt                            >  2:1201467/1‑150 (MQ=255)                                                                                                                         tCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGGGCGCCGTCAGGACATCCGTTACCTGCGCCGCCTGTGGGAGCAGATTGGCACCCAGATCAAGACCTGCGGCGCGCCCACGGTCATTTACGAAGACCTTGGCCTGGCCCTGCGTa                           <  1:919177/150‑1 (MQ=255)                                                                                                                           ttGCGCACCGCCGCCGAAGGCGCGCgtgcgcaagatgaagccgccggcatccttgatgttttcgccatccatgcagtcgctgaccacttgcttgaggcgctcacgctcggcttcgtcctcgattttcagcgaaataccgacatggctgct                         <  1:77929‑M2/150‑126 (MQ=255)                                                                                                                                cACCGCCGCCGAAGGCGCGCgtgggcaagatgaagccgccggcatccttga                                                                                                                       >  2:1028423‑M2/1‑20 (MQ=255)                                                                                                                                cACCGCCGCCGAAGGCGCGCgtgggcaagatgaagccgccggcatccttga                                                                                                                       <  1:1028423‑M2/51‑32 (MQ=255)                                                                                                                                       gccgAAGGCGCGCgtgcgcaagatgaagccgccggcatccttgatgttttcgccatccatgcagtcgctgaccacttgcttgaggcgctcacgctcggcttcgtcctcgattttcagcgaaataccgacatggctgctgcgtggcatgta             >  2:77929‑M2/1‑13 (MQ=255)                                                                                                                                                  gcgTGCCGAGGAGATCTTGCAGGACATCCGTTACCTGCGCCGCCTGTGGGAGCAGATTGGCACCCAGATCAAGACCTGCGGCGCGCCCACGGTCATTTACGAAGACCTTGGCCTGGCCCTGCGTACCCTGCGCGACCTGGTCAACCCGaa  <  1:1201467/150‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                     CACGCAGCAGCCATGTCGGTATTTCGCTGAAAATCGAGGACGAAGCCGAGCGTGAGCGCCTCAAGCAAGTGGTCAGCGACTGCATGGATGGCGAAAACATCAAGGATGCCGGCGGCTTCATCTTGCGCACCGCCGCCGAAGGCGCGCGTGCCGAGGAGATCTTGCAGGACATCCGTTACCTGCGCCGCCTGTGGGAGCAGATTGGCACCCAGATCAAGACCTGCGGCGCGCCCACGGTCATTTACGAAGACCTTGGCCTGGCCCTGCGTACCCTGCGCGACCTGGTCAACCCGAA  >  NC_002947/1079184‑1079478

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.