New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1083147	48 (1.060)	6 (0.140)	5/232	NT	11.2%	coding (2797/3822 nt)	PP_0938	hypothetical protein
	?	NC_002947	= 1083171	50 (1.180)					coding (2821/3822 nt)	PP_0938	hypothetical protein

AAGAGCAGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGCGGCTGCCTGCCGCCAGCGCCGCTGAACAGCAGGCTGAAGACGGCCCCGAC  >  NC_002947/1083028‑1083320                                                                                                                                                |                                                                                                                                                      aaGAGCAGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCcggcct                                                                                                                                                 <  1:736633‑M2/150‑7 (MQ=255)         gCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTg                                                                                                                                         >  1:269461/1‑150 (MQ=255)            ggCCGGCTGGCTGGGGACGATCACGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTgcgc                                                                                                                                      <  2:579048/150‑1 (MQ=255)            ggCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTgcgc                                                                                                                                      >  2:1069065/1‑150 (MQ=255)                       tggGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCaa                                                                                                                           >  2:396157/1‑150 (MQ=255)                       tggGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCaa                                                                                                                           <  2:142702/150‑1 (MQ=255)                         gggACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAgg                                                                                                                         <  1:467817/150‑1 (MQ=255)                           gacgacCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGaa                                                                                                                       <  1:95360/150‑1 (MQ=255)                               acCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCTACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCa                                                                                                                   >  2:567157/1‑150 (MQ=255)                                ccccGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCAt                                                                                                                  <  2:1004384/150‑1 (MQ=255)                                 cccGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTTGGATTTGCGCCTCGACAGCAAGGAAGTCAtt                                                                                                                 >  2:666017/1‑150 (MQ=255)                                         cAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATgc                                                                                                         <  2:736633/150‑1 (MQ=255)                                               gcgGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAg                                                                                                                      <  2:1105424/131‑1 (MQ=255)                                               gcgGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAg                                                                                                                      >  1:1105424/1‑131 (MQ=255)                                                 ggCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTAc                                                                                                 >  2:417635/1‑150 (MQ=255)                                                  gCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAACAAGGAAGTCATTGGTAATGCGCGCGTAcc                                                                                                >  1:1198557/1‑150 (MQ=255)                                                   cAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCg                                                                                               >  2:57604/1‑150 (MQ=255)                                                         cTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAAAGCGCGCGTACCGGATGcc                                                                                         >  2:821408/1‑150 (MQ=255)                                                                     gcccTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGccc                                                                             <  1:229440/148‑1 (MQ=255)                                                                       ccTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTTGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGaa                                                                                                                       <  1:1114346/106‑1 (MQ=255)                                                                       ccTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGaa                                                                                                                       >  2:1114346/1‑106 (MQ=255)                                                                        cTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTg                                                                          <  2:269461/150‑1 (MQ=255)                                                                         tGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTgg                                                                         <  2:1099001/150‑1 (MQ=255)                                                                               tCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTgcgc                                                                                                                                      <  2:123980/83‑1 (MQ=255)                                                                               tCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTgcgc                                                                                                                                      >  1:123980/1‑83 (MQ=255)                                                                                  gCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCCCTGGTGATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCa                                                                <  1:821408/150‑1 (MQ=255)                                                                                   ccAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCAt                                                               <  1:567157/150‑1 (MQ=255)                                                                                     aGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGc                                                             >  1:512478/1‑150 (MQ=255)                                                                                      gTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGgcgcgcacgacc                                                                         <  1:911389/137‑7 (MQ=255)                                                                                      gTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGgcgcgcacgacc                                                                         >  2:911389/1‑131 (MQ=255)                                                                                      gTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTc                                                                       >  2:1166344/1‑139 (MQ=255)                                                                                      gTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTc                                                                       <  1:1166344/139‑1 (MQ=255)                                                                                          aaaGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTg                                                                                                                >  2:662426/1‑94 (MQ=255)                                                                                          aaaGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTg                                                                                                                <  1:662426/94‑1 (MQ=255)                                                                                            aGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCtt                                                      <  2:961696/150‑1 (MQ=255)                                                                                               cTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGCg                                                   >  1:253859/1‑150 (MQ=255)                                                                                                ttCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGAGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGCgg                                                  >  1:26528/1‑150 (MQ=255)                                                                                                     cATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGCGGctgcc                                             >  2:182295/1‑150 (MQ=255)                                                                                                            cTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGc                                                    >  1:365469/1‑136 (MQ=255)                                                                                                            cTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGc                                                    <  2:365469/136‑1 (MQ=255)                                                                                                             tGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCcggcctggttcaggtccatgccgaaggctttcaactggccgatgctcaggtcgacgctttgcaggttctgccgcgcgctgccaccggggtcgtccccagccagccggcccgcct                                     <  2:985847‑M2/150‑115 (MQ=255)                                                                                                                 ccAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCcggcctggttcaggtccatgccgaaggctttcaactggccgatgctcaggtcgacgctttgcaggttctgccgcgcgctgccaccggggtcgtccccagccagccggcccgcctgctc                                 <  2:324789‑M2/150‑119 (MQ=255)                                                                                                                 ccAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGc                                                    <  1:609547/131‑1 (MQ=255)                                                                                                                 ccAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGc                                                    >  2:609547/1‑131 (MQ=255)                                                                                                                 ccAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGCGGCTGCCTGCCGCCAgcgc                                 >  1:983561/1‑150 (MQ=255)                                                                                                                  cAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATgcgc                                                                                                       >  2:398879/1‑79 (MQ=255)                                                                                                                  cAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATgcgc                                                                                                       <  1:398879/79‑1 (MQ=255)                                                                                                                    ggCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAACAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGCGGCTGCCTGCCGCCAGcgccgc                              <  2:1198557/150‑1 (MQ=255)                                                                                                                     gCCGTGGTCCGCCTGGCCCGGGGCGGCCcggcctggttcaggtccatgccgaaggctttcaactggccgatgctcaggtcgacgctttgcaggttctgccgcgcgctgccaccggggtcgtccccagccagccggcccgcctgctcttgc                             <  1:314104‑M2/150‑123 (MQ=255)                                                                                                                     gCCGTGGTCCGCCTGGCCCGGGGCGGCCcggcctggttcaggtccatgccgaaggctttcaactggccgatgctcaggtcgacgctttgcaggttctgccgcgcgctgccaccggggtcgtccccagccagccgg                                            <  1:1069921‑M2/135‑108 (MQ=255)                                                                                                                     gCCGTGGTCCGCCTGGCCCGGGGCGGCCcggcctggttcaggtccatgccgaaggctttcaactggccgatgctcaggtcgacgctttgcaggttctgccgcgcgctgccaccggggtcgtccccagccagccgg                                            >  2:1069921‑M2/1‑28 (MQ=255)                                                                                                                     gCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGCGGCTGCCTGCCGCCAGCGCCGCt                             <  1:1069065/150‑1 (MQ=255)                                                                                                                          ggTCCGCCTGGCCCGGGGCGGCCcggcctggttcaggtccatgccgaaggctttcaactggccgatgctcaggtcgacgctttgcaggttctgccgcgcgctgccaccggggtcgtccccagccagccggcccgcctgctcttgccaagg                        >  1:985847‑M2/1‑23 (MQ=255)                                                                                                                                  tGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGCGGCTGCCTGCCGCCAGCGCCGCTGAACAGCAGGCTg                >  2:535888/1‑150 (MQ=255)                                                                                                                                     cccGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGCGGCTGCCTGCCGCCAGCGCCGCTGAACAGCAGGCTGAAg             >  2:751455/1‑150 (MQ=255)                                                                                                                                      ccGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGCg                                                   <  1:512533/111‑1 (MQ=255)                                                                                                                                      ccGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGCg                                                   >  2:512533/1‑111 (MQ=255)                                                                                                                                            cggcccggcctggttcaggtccatgccgaaggctttcaactggccgatgctcaggtcgacgctttgcaggttctgccgcgcgctgccaccggggtcgtccccagccagccggcccgcctgctcttgccaaggggccaggtccagggtctc      >  2:314104‑M2/1‑5 (MQ=255)                                                                                                                                               cccggccTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGCGGCTGCCTGCCGCCAGCGCCGCTGAACAGCAGGCTGAAGACGGCCCCGa   <  2:26528/150‑1 (MQ=255)                                                                                                                                                ccggccTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGCGGCTGACTGCCGCCAGCGCCGCTGAACAGCAGGCTGAAGACGGCCCCGAc  >  2:871330/1‑150 (MQ=255)                                                                                                                                                |                                                                                                                                                      AAGAGCAGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGCGGCTGCCTGCCGCCAGCGCCGCTGAACAGCAGGCTGAAGACGGCCCCGAC  >  NC_002947/1083028‑1083320

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.