New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1765970 | 41 (0.910) | 7 (0.170) | 6/228 | NT | 15.1% | intergenic (+13/‑34) | PP_1576/PP_1577 | immunity protein/lambda family tail tape meausure protein |
? | NC_002947 | = 1765975 | 41 (0.990) | intergenic (+18/‑29) | PP_1576/PP_1577 | immunity protein/lambda family tail tape meausure protein |
CCAGTTGGTCAGATTGAGAGAGTCGGCAGTTCGTCTAGGTATGAAGAGCTTGAGAAAATTTCGGCCCTCCGAAGCAGCGGAGCTTTAACTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCACTCTGACCCTTGATGTCATAGCCCAGGTAGGCGGTTTCGTTGCCGGCATGGATAAGGCCGAGCGCAGCTCAGAAAAGTGGCGAAAGCAGGTCGAAAAGA > NC_002947/1765826‑1766124 | gcagttGGTCAGATGGAGAGAGGCGGCAGTGCGTCTAGGGATGAAGAGCTTGAGAAAATGTGGGCCCGCCGAAGCAGCGGAGCTTTAACTGCGGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGt < 2:1080244/149‑1 (MQ=255) cAGTTGGTCAGATTGAGAGAGTCGGCAGTTCGTCTAGGTATGAAGAGATTGAGAAAATTTCGGCCCTCCGAAGCAGCGGAGCTTTAACTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTg < 1:820741‑M2/150‑2 (MQ=255) gTTGGTCAGATTGAGAGAGTCGGCAGTTCGTCTAGGTATGAAGAGCTTGAGAAAATTTCGGCCCTCCGAAGCAGCGGAGCTTTAACTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTgcg < 1:1196350‑M2/150‑4 (MQ=255) gTCAGATTGAGAGAGTCGGCAGTTCGTCTAGGTATGAAGAGCTTGAGAAAATTTCGGCCCTCCGAAGCAGCGGAGCTTTAACTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTgcgggtt < 2:527484‑M2/150‑8 (MQ=255) gTCAGATTGAGAGAGTCGGCAGTTCGTCTAGGTATGAAGAGCTTGAGAAAATTTCGGCCCTCCGAAGCAGCGGAGCTTTAACTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTgcgggtt < 1:309119‑M2/150‑8 (MQ=255) gATTGAGAGAGTCGGCAGTTCGTCTAGGTATGAAGAGCTTGAGAAAATTTCGGCCCTCCGAAGCAGCGGAGCTTTAACTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGtttttt < 1:601856/150‑1 (MQ=255) agagagTCGGCAGTTCGTCTAGGTATGAAGAGCTTGAGAAAATTTCGGCCCTCCGAAGCAGCGGAGCTTTAACTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑ACTTGgcgggtttttatttca > 1:1007109‑M2/1‑134 (MQ=255) gagTCGGCAGTTCGTCTAGGTATGAAGAGCTTGAGAAAATTTCGGCCCTCCGAAGCAGCGGAGCTTTAACTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCg < 2:820741/150‑1 (MQ=255) tCGGCAGTTCGTCTAGGTATGAAGAGCTTGAGAAAATTTCGGGAATTCGAAGCAGCGGAGCTTTAACTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAAACCAC‑ACTTGgcggggttttatttcactttag < 1:1114730‑M2/150‑23 (MQ=255) gCAGTTCGTCTAGGTATGAAGAGCTTGAGAAAATTTCGGCCCTCCGAAGCAGCGGAGCTTTAACTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGaaa < 1:193056/150‑1 (MQ=255) aGTTCGTCTAGGTATGAAGAGCTTGAGAAAATTTCGGCCCTCCGAAGCAGCGGAGCTTTAACTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAAc > 2:877097/1‑150 (MQ=255) tCGTCTAGGTATGAAGAGCTTGAGAAAATTTCGGCCCTCCGAAGCAGCGGAGCTTTAACTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAAt < 2:1196350/150‑1 (MQ=255) gTCTAGGTATGAAGAGCTTGAGAAAATTTCGGCCCTCCGAAGCAGCGGAGCTTTAACTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGga > 1:213653/1‑139 (MQ=255) gTCTAGGTATGAAGAGCTTGAGAAAATTTCGGCCCTCCGAAGCAGCGGAGCTTTAACTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGga < 2:213653/139‑1 (MQ=255) tCTAGGTATGAAGAGCTTGAGAAAATTTCGGCCCTCCGAAGCAGCGGAGCTTTACATGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGc < 1:317796/150‑1 (MQ=255) tCTAGGTATGAAGAGCTTGAGAAAATTTCGGCCCTCCGAAGCAGCGGAGCTTTAACTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGc < 2:726064/150‑1 (MQ=255) gTATGAAGAGCTTGAGAAAATTTCGGCCCTCCGAAGCAGCGGAGCTTTAACTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCaa < 2:219940/150‑1 (MQ=255) aTGAAGAGCTTGAGAAAATTTCGGCCCTCCGAAGCAGCGGAGCTTTAACTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGCACTTGcgggtttttatttcactttagtattcga > 1:284175‑M2/1‑111 (MQ=255) aTGAAGAGCTTGAGAAAATTTCGGCCCTCCGAAGCAGCGGAGCTTTAACTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGCACTTGcgggtttttatttcactttagtattcga < 2:284175‑M2/139‑29 (MQ=255) tGAAGAGCTTGAGAAAATTTCGGCCCTCCGAAGCAGCGGAGCTTTAACTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACaa < 1:1073759/138‑1 (MQ=255) tGAAGAGCTTGAGAAAATTTCGGCCCTCCGAAGCAGCGGAGCTTTAACTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACaa > 2:1073759/1‑138 (MQ=255) tGAAGAGCTTGAGAAAATTTCGGCCCTCCGAAGCAGCGGAGCTTTAACTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGAt < 1:243422/150‑1 (MQ=255) gAAGAGCTTGAGAAAATTTCGGCCCTCCGAAGCAGCGGAGCTTTAACTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑ACTTGgcgggtttttatttcactttagtattcgagacttctcccgat > 2:1114730‑M2/1‑108 (MQ=255) aaaaTTTCGGCCCTCCGAAGCAGCGGAGCTTTAACTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCActct < 2:309119/150‑1 (MQ=255) tttCGGCCCTCCGAAGCAGCGGAGCTTTAACTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGCACTTGcgggtttttatttcactttagtattcga > 2:892268‑M2/1‑93 (MQ=255) tttCGGCCCTCCGAAGCAGCGGAGCTTTAACTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGCACTTGcgggtttttatttcactttagtattcga < 1:892268‑M2/121‑29 (MQ=255) tttCGGCCCTCCGAAGCAGCGG‑GCTTTAACTGCCGAGGAGCTCGACCGGGACTAGTCTTGAATAATAAAGGGAAATAAAAACCCGC‑CAAGTGCGGGGTTTTTAATGTCCGGGGAAAAAAACTGTGGCAAGATCTCTCGGCACTCTGAccc > 1:813443/1‑150 (MQ=255) tCGGCCCTCCGAAGCAGCGGAGCTTTAACTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCACTCTGACCCt < 1:498950/150‑1 (MQ=255) ggCCCTCCGAAGCAGCGGAGCTTTAACTGGCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCACTCTGACCCTTg < 1:877097/150‑1 (MQ=255) gAAGCAGCGGAGCTTTAACTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCACTCTGACCCTTGATGTCATa > 1:193925/1‑150 (MQ=255) tttAACTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTGTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCACTCTGACCCTTGATGTCATAGCCCAGGTAGGCg > 2:834503/1‑150 (MQ=255) aaCTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCACTCTGACCCTTGATGTCATAGCCCAGGTAGGCGGtt > 1:313948/1‑150 (MQ=255) tGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCACTCTGACCCTTGATGTCATAGCCCAGGTAGGCGGTTTCg > 1:282849/1‑150 (MQ=255) aggagTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCACTCTGACCCTTGATGTCATAGCCCAGGTAGGCGGTTTCGTTGcc < 2:21728/150‑1 (MQ=255) ttCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCACTCTGACCCTTGATGTCATAGCCCAGGTAGGCGGTTTCGTTGCCGGCAt > 1:724556/1‑150 (MQ=255) ttCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCACTCTGACCCTTGATGTCATAGCCCAGGTAGGCGGTTTCGTTGCCGGCAt < 2:282849/150‑1 (MQ=255) aaGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCACTCTGACCCTTGATGTCATAGCCCAGGTAGGCGGTTTCGTTGCCGGCATGGATAAGGCCGa < 1:764629/150‑1 (MQ=255) aGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCACTCTGACCCTTGATGTCATAGCCCAGGTAGGCGGTTTCGTTGCCGGCATGGATAAGGCCGAg < 1:751952/150‑1 (MQ=255) tctcGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCACTCTGACCCTTGATGTCATAGCCCAGGTAGGCGGTTTCGTTGCCGGCATGGATAAGGCCGAgcg > 2:65609/1‑150 (MQ=255) tACTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCACTCTGACCCTTGATGTCATAGCCCAGGTAGGCGGTTTCGTTGCCGGCATGGATAAGGCCGAGCGCAGCTCa < 1:527484/150‑1 (MQ=255) cTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCACTCTGa > 2:1004759/1‑83 (MQ=255) cTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCACTCTGa < 1:1004759/83‑1 (MQ=255) tAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCACTCTGACCCTTGATGTCATAGCCCAGGTAGGCGGTTTCGTTGCCGGCATGGATAAGGCCGAGCGCAGCTCAGaa > 2:782632/1‑150 (MQ=255) aaaGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCACTCTGACCCTTGATGTCATAGCCCAGGTAGGCGGTTTCGTTGCCGGCATGGATAAGGCCGAGCGCAGCTCAGaaa > 1:1032353/1‑150 (MQ=255) aaGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCgg < 1:754787/72‑1 (MQ=255) aaGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCgg > 2:754787/1‑72 (MQ=255) tGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCACTCTGACCCTTGAt < 1:492303/85‑1 (MQ=255) tGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCACTCTGACCCTTGAt > 2:492303/1‑85 (MQ=255) tGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCACTCTGACCCTTGATGTCATAGCCCAGGTAGGCGGTTTCGTTGCCGGCATGGATAAGGCCGAGCGCAGCTCAGAAAAGTg > 2:287852/1‑150 (MQ=255) gAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCACTCTGACCCTTGATGTCATAGCCCAGGTAGGCGGTTTCGTTGCCGGCATGGATAAGGCCGAGCGCAGCTCAGAAAAGTgg < 2:724556/150‑1 (MQ=255) aaaTAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCACTCTGACCCTTGAt < 1:92409/83‑1 (MQ=255) aaaTAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCACTCTGACCCTTGAt > 2:92409/1‑83 (MQ=255) aaaTAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCACTCTGACCCTTGATGTCATAGCCCAGGTAGGCGGTTTCGTTGCCGGCATGGATAAGGCCGAGCGCAGCTCAGAAAAGTGGc < 1:65609/150‑1 (MQ=255) cGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCACTCTGACCCTTGATGTCATAGCCCAGGTAGGCGGTTTCGTTGCCGGCATGGATAAGGCCGAGCGCAGCTCAGAAAAGTGGCGAAAGCAGGTc > 1:663772/1‑150 (MQ=255) aGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCACTCTGACCCTTGATGTCATAGCCCAGGTAGGCGGTTTCGTTGCCGGCATGGATAAGGCCGAGCGCAGCTCAGAAAAGTGGCGAAAGCAGGTCGaaaa < 2:313948/150‑1 (MQ=255) tGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCACTCTGACCCTTGATGTCATAGCCCAGGTAGGCGGTTTCGTTGCCGGCATGGATAAGGCCGAGCGCAGCTCAGAAAAGTGGCGAAAGCAGGTCGAAAAGa < 2:1032353/150‑1 (MQ=255) | CCAGTTGGTCAGATTGAGAGAGTCGGCAGTTCGTCTAGGTATGAAGAGCTTGAGAAAATTTCGGCCCTCCGAAGCAGCGGAGCTTTAACTGCCGAGGAGTTCGATCGGGAGAAGTCTCGAATACTAAAGTGAAATAAAAACCCGC‑CAAGTGCGGGTTTTTTAATGTCCGGAGAAAACAATGGCGTCAAGATCTCTCGGCACTCTGACCCTTGATGTCATAGCCCAGGTAGGCGGTTTCGTTGCCGGCATGGATAAGGCCGAGCGCAGCTCAGAAAAGTGGCGAAAGCAGGTCGAAAAGA > NC_002947/1765826‑1766124 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |