New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 205602148 (1.060)6 (0.150) 5/216 NT 10.8% intergenic (+27/‑116) aroC/PP_1831 chorismate synthase/membrane protein
?NC_002947 = 2056095 57 (1.450)intergenic (+101/‑42) aroC/PP_1831 chorismate synthase/membrane protein

GCAGAATGCCGATGTGCAAGTGAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCTGTACTTCGACCACCTGGGC  >  NC_002947/2055946‑2056241
                                                                                                                                                     |                                                                                                                                                   
gcAGAATGCCGATGTGCAAGTGAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTc                                                                                                                                                     >  1:525075/1‑150 (MQ=255)
      tGCCGATGTGCAAGTGAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCATACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCacccgc                                                                                                                                               <  2:776387‑M2/150‑7 (MQ=255)
        ccGATGTGCAAGTGAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCacccgcga                                                                                                                                             >  2:270706‑M2/1‑142 (MQ=255)
             gtgCAAGTGAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCACTCCGGTTCAGTGACAGGGTGAAAGCCGCGTAGGAGCGGGTTCacccgcgaagagg                                                                                                                                        <  1:219588‑M2/150‑14 (MQ=255)
               gaaagtGAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCCCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGCGACAGGGTGAAATCCGCGTAGGAGCGGGTACacccgcgaagaggcc                                                                                                                                      >  2:171242‑M2/3‑135 (MQ=255)
                 aaGTGAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAggccgg                                                                                                                                    >  1:537604/1‑150 (MQ=255)
                      aaTACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCacccgcgaagag                                                                                                                                         >  2:139301‑M2/1‑128 (MQ=255)
                      aaTACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCacccgcgaagag                                                                                                                                         <  1:139301‑M2/140‑13 (MQ=255)
                       aTACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGGGCGGGTTCACCCGCGAAGAGGCCGGCCCAgg                                                                                                                              <  1:846811/150‑1 (MQ=255)
                               gTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAGCCCCCCGCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCcaca                                                                                                                      <  1:73309/150‑1 (MQ=255)
                                 gCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAg                                                                                                                    <  2:104511/150‑1 (MQ=255)
                                        cAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCAccc                                                                                                             >  1:466173/1‑150 (MQ=255)
                                           cgcTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTGCCTTGGGATATCGCTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCAt                                                                                                          <  2:864150/150‑1 (MQ=255)
                                           cgcTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAAGCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCAt                                                                                                          <  1:134439/150‑1 (MQ=255)
                                           cgcTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTACTACATTGGCATATCACTGCCCTCAGGTGCAGTGACAGAGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCAt                                                                                                          <  2:50921/150‑1 (MQ=255)
                                                aTCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAAc                                                                                                    >  1:47392/1‑150 (MQ=255)
                                                   cAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCa                                                                                                 >  2:284662/1‑150 (MQ=255)
                                                    aaCTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGGCCTCAGTTGCAGTGACAAGGTGAAATCCGCGTAGCAGGGGGGCAACCCGCGAAGAGGCCGGCCCAGGTCCGCAGCAGGCCACCCCATGCAAACCAt                                                                                                >  1:403159/1‑150 (MQ=255)
                                                    aaCTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCAt                                                                                                >  1:373037/1‑150 (MQ=255)
                                                    aaCTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCAt                                                                                                <  2:226890/150‑1 (MQ=255)
                                                    aaCTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCGCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCAt                                                                                                >  2:146878/1‑150 (MQ=255)
                                                     aCTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACCGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATc                                                                                               <  1:383735/150‑1 (MQ=255)
                                                      cTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATcc                                                                                              <  1:284662/150‑1 (MQ=255)
                                                        gCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATcccc                                                                                            <  1:775294/150‑1 (MQ=255)
                                                          aaCGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTa                                                                                          >  1:1005813/1‑150 (MQ=255)
                                                                 tctTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGgcgc                                                                                   <  2:484237/150‑1 (MQ=255)
                                                                 tctTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGgcgc                                                                                   >  1:1070289/1‑150 (MQ=255)
                                                                   ttCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGAGGAGGAGCGGGTTCACACGCGAAGAAGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCt                                                                                 >  1:687434/1‑150 (MQ=255)
                                                                        gggTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCacccgcgaagaggccgttgcagttggatcagcgctggcccagcaccggggtattcacttgcacatcggcatt                                                                             <  2:278398‑M2/150‑73 (MQ=255)
                                                                        gggTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAgg                                                                                                                   <  1:405919/112‑1 (MQ=255)
                                                                        gggTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAgg                                                                                                                   >  2:405919/1‑112 (MQ=255)
                                                                        gggTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGATTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCa                                                                            <  1:1174859/150‑1 (MQ=255)
                                                                        gggTAAACCCGCCCCTACGTTGGGATATCACTGCTCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCa                                                                            <  2:1191519/150‑1 (MQ=255)
                                                                          gTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGc                                                                          <  1:614055/150‑1 (MQ=255)
                                                                           tAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCt                                                                         <  2:47392/150‑1 (MQ=255)
                                                                               cccGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCacccgcgaagaggccgttgcagttggatcagcgctggcccagcaccggggtattcacttgcacatcggcattctgcgca                                                                      <  2:626623‑M2/150‑80 (MQ=255)
                                                                                ccGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCacccgcgaagaggccgttgcagttggatcagcgctggcccagcaccggggtattcacttgcacatcggcattctgcgcac                                                                     <  1:818786‑M2/150‑81 (MQ=255)
                                                                                ccGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTAc                                                                    <  2:1070289/150‑1 (MQ=255)
                                                                                 cGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCacccgcgaagaggccgttgcagttggatcagcgctggcccagcaccggggtattcacttgcacatcggcattctgcgcacg                                                                    >  2:818786‑M2/1‑69 (MQ=255)
                                                                                  gCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGACATCCGCGCACCCCCGGGTTCACCCGCCAAGAGGCCGGCCCAGGTCCCCACCAGGCCACCCCCTCCCACCCCTCCCCTACTCGCCCCTGTCCCGCTCCCAccc                                                                  >  1:628236/1‑149 (MQ=255)
                                                                                   cTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTg                                                                 <  2:631015/150‑1 (MQ=255)
                                                                                    tCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCATCTTCTACCTGt                                                                >  1:848415/1‑150 (MQ=255)
                                                                                      cTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTc                                                              >  2:467893/1‑150 (MQ=255)
                                                                                      cTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTc                                                              <  2:373037/150‑1 (MQ=255)
                                                                                          aTTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCGAGCTTATAACTGTTCTAtt                                                          >  2:558483/1‑150 (MQ=255)
                                                                                             gggATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCacccgcgaagaggccgttgcagttggatcagcgctggcccagcaccggggtattcacttgcacatcggcattctgcgcacggtggcgcagcag                                                        >  1:278398‑M2/1‑57 (MQ=255)
                                                                                             gggATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCacccgcgaagaggccgttgatgtcggatcagcgctggctctccaccaggggtttcacgtgcacatcggcattctgcgcacggtggcgcagcag                                                        >  1:626623‑M2/1‑57 (MQ=255)
                                                                                              ggATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGc                                                      >  1:388078/1‑150 (MQ=255)
                                                                                                 tatCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCct                                                   >  2:645497/1‑150 (MQ=255)
                                                                                                   tCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCctgc                                                 >  2:1024198/1‑150 (MQ=255)
                                                                                                    cACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGCCGCTGGTTCCCCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCTTCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCctgct                                                <  1:558483/150‑1 (MQ=255)
                                                                                                     aCTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCACGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCctgctg                                               >  2:6930/1‑150 (MQ=255)
                                                                                                       tGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTggg                                             >  1:491976/1‑150 (MQ=255)
                                                                                                         cccTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCt                                           >  1:507394/1‑150 (MQ=255)
                                                                                                             cAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCcac                                       <  2:687434/150‑1 (MQ=255)
                                                                                                                       gACAGAGTGAACCCCGGGTAGGAGAGGGTTCACCAGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGTCGCCTGTCCAGCTTCTACCTGTTCTATTTCCCTCTGCTGGGCTCCACCGCACCGTTc                             <  2:525075/150‑1 (MQ=255)
                                                                                                                        aCAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTcc                            <  2:466173/150‑1 (MQ=255)
                                                                                                                           gggTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAg                                                                                                                    <  2:409784/60‑1 (MQ=255)
                                                                                                                           gggTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAg                                                                                                                    >  1:409784/1‑60 (MQ=255)
                                                                                                                            ggTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCcac                                       >  2:760813/1‑135 (MQ=255)
                                                                                                                            ggTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCcac                                       <  1:760813/135‑1 (MQ=255)
                                                                                                                             gTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGgcg                       <  2:89205/150‑1 (MQ=255)
                                                                                                                             gTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGgcg                       >  1:89205/1‑150 (MQ=255)
                                                                                                                             gTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTGTTTCGCGCTCCTGGGCTTCACCGCACAGTTCATGgcg                       >  2:33505/1‑150 (MQ=38)
                                                                                                                              tGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGgcgc                      >  1:528434/1‑150 (MQ=255)
                                                                                                                                    ccGCGTAGGCGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAAGCCGGCTCGTCGCCGCCCGCTGCGGCGGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCTGTACt                <  1:574440/150‑1 (MQ=255)
                                                                                                                                      gcgTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCTGTACTTc              >  1:504576/1‑150 (MQ=255)
                                                                                                                                      gcgTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCTGTACTTc              >  1:386357/1‑150 (MQ=255)
                                                                                                                                        gTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCTGTACTTc              <  2:930144/148‑1 (MQ=255)
                                                                                                                                        gTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCTGTACTTc              >  1:930144/1‑148 (MQ=255)
                                                                                                                                         tAGGAGCGGGTTCACCCGCCAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCTGTACTTCGac           <  2:537604/150‑1 (MQ=255)
                                                                                                                                                 ggTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCTGTACTTCGACCACCTggg   <  2:1005813/150‑1 (MQ=255)
                                                                                                                                                 ggTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCTGTACTTCGACCACCTggg   <  1:1024198/150‑1 (MQ=255)
                                                                                                                                                  gTTCacccgcgaagaggccgttgcagttggatcagcgctggcccagcaccggggtattcacttgcacatcggcattctgcgcacggtggcgcagcaggtggtccatcaacgcaatggccatcatcgcctcggcaatcggcgtggcacgga   <  2:372980‑M2/150‑147 (MQ=255)
                                                                                                                                                  gTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCTGTACTTCGACCACCTGGGc  <  2:504576/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
GCAGAATGCCGATGTGCAAGTGAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCTGTACTTCGACCACCTGGGC  >  NC_002947/2055946‑2056241

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.