New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5208193 =	51 (1.130)	4 (0.090)	3/236	NT	7.7%	coding (564/933 nt)	PP_4589	D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
	?	NC_002947	5208223 =	47 (1.090)					coding (534/933 nt)	PP_4589	D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
Rejected: Coverage evenness skew score above cutoff.

ACCACGCCCGGCATTGATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTGGCAACGCCGTACAGCGCCACACCAAACGGCTGCAGGAACTCGGCCACACGCTGACCAATGTCGCCTACACCCACAATGAGAACCTTGCGCCCTTCCAGGCTGCGC  >  NC_002947/5208079‑5208370                                                                                                                                                 |                                                                                                                                                    accacGCCCGGCATTGATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGcgccgc                                                                                                                                                <  2:235261/150‑1 (MQ=255)      gCCCGGCATTGATGAACAAGTCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCt                                                                                                                                           >  1:818491/1‑150 (MQ=255)      gCCCGGCATTGATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGGATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCt                                                                                                                                           <  1:570892/150‑1 (MQ=255)      cctcGGCATTGATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCt                                                                                                                                           >  1:830966/4‑150 (MQ=255)         cGGCATTGATGAGCATGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTcga                                                                                                                                        <  1:64643/150‑1 (MQ=255)         cGGCATTGATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTcga                                                                                                                                        <  2:722258/150‑1 (MQ=255)                   gaACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGgcgc                                                                                                                              >  1:333322/1‑150 (MQ=255)                      cAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTg                                                                                                                           >  2:324562/1‑150 (MQ=255)                             gAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACgg                                                                                                                    <  1:313173/150‑1 (MQ=255)                              aGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACggg                                                                                                                   >  2:563362/1‑150 (MQ=255)                                      aaGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGctgctg                                                                                                           >  2:143125/1‑150 (MQ=255)                                       aGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTgg                                                                                                          >  1:155097/1‑150 (MQ=255)                                       aGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGACTGCTCACGGGCGCTGCTgg                                                                                                          <  1:71582/150‑1 (MQ=255)                                              gAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGGAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTGGCAACGcc                                                                                                   <  2:809935/150‑1 (MQ=255)                                              gAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTGGCAACGcc                                                                                                   >  1:491240/1‑150 (MQ=255)                                                      cggcgTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTGGCAACGCCGTACAgcg                                                                                           <  1:250168/150‑1 (MQ=255)                                                           tCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTGGCAACGCCGTACAGCGCcaca                                                                                      >  2:321878/1‑150 (MQ=255)                                                            cATACAGGTCATGAGTCGCCGGCGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTGGCAACGCCGTACAgcg                                                                                           >  1:746692/1‑144 (MQ=255)                                                            cATACAGGTCATGAGTCGCCGGCGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTGGCAACGCCGTACAgcg                                                                                           <  2:746692/144‑1 (MQ=255)                                                             aTACAGGTGATGAGGGGCCGGGGTATCCGGCAGCAGGTTCCGCACGTAGTCGACCTGGCCCACCAAGCGCGGCAGGTCGTCCAGCGCCGCCACCTCGACCAACGGCGCCTGCTCACGGGCGCTGCTGGCAACGCCGTACAGCGCCACAcc                                                                                    >  2:16567/1‑150 (MQ=255)                                                              tACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGTTGCCAGCAGCGcccgtga                                                                                              <  1:1045875/139‑6 (MQ=255)                                                                cAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGCTAGAACAGCGCCGCCACATCAACAAGCTGGGCCGACCCACGTTGGCGGCTGGCAACGCCGTACAGCGCCACACCaaa                                                                                 <  1:510598/150‑1 (MQ=255)                                                                   gTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTGGCAACGCCGTACAGCGCCACACCAAACgg                                                                              <  2:830966/150‑1 (MQ=255)                                                                   gTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTGGCAACGCCGTACAGCGCCACACCAAACgg                                                                              >  1:813858/1‑150 (MQ=255)                                                                        gAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTGGCAACGCCGTACAGCGCCACACCAAACGGCTTCa                                                                         <  1:1206912/150‑1 (MQ=255)                                                                         aGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTGGCAACGCCGTACAGCGCCACACCAAACGGCTGCAg                                                                        <  2:333322/150‑1 (MQ=255)                                                                           tCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTGGCAACGCCGTACAGCGCCACACCAAACGGCTGCAg                                                                        <  1:144966/148‑1 (MQ=255)                                                                           tCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTGGCAACGCCGTACAGCGCCACACCAAACGGCTGCAg                                                                        >  2:144966/1‑148 (MQ=255)                                                                             gCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTGGCAACGCCGTACAGCGCCACACCAAACGGCTGCAGGAAc                                                                    >  2:473471/1‑150 (MQ=255)                                                                             gCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTGGCAACGCCGTACAGCGCCACACCAAACGGCTGCAGGAAc                                                                    <  1:143125/150‑1 (MQ=255)                                                                                ggggTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTGGCAACGCCGTACAGCGCCACACCAAACGGCTGCAGGAACTCg                                                                 <  1:321878/150‑1 (MQ=255)                                                                                 gggTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTGGCAACGCCGTACAGCGCCACACCAAACGGCTGCAGGAACTCgg                                                                >  1:300811/1‑150 (MQ=255)                                                                                  ggTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTGGCAACGCCGTACAGCGCCACACCAAACGGCTGCAGGAACTCGGc                                                               <  1:591011/150‑1 (MQ=255)                                                                                         ggCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTGGCAACGCCGTACAGCGCCACACCAAACGGCTGCAGGAACTCGGCCACACGc                                                        <  2:155097/150‑1 (MQ=255)                                                                                          gcagcaGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCACCGTCTCACGGGCGCTGCTGGCAACGCCGTACAGCGCCACACCAAACGGCTGCAGGAACTCGGCCACACGCt                                                       >  1:208684/1‑150 (MQ=255)                                                                                             gcagGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCgctgct                                                                                                            <  2:888560/94‑1 (MQ=255)                                                                                             gcagGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCgctgct                                                                                                            >  1:888560/1‑94 (MQ=255)                                                                                                  ttCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTGGCAACGCCGTACAGCGCCACACCAAACGGCTGCGGGAACTCGGCCACACGCTGACCAATg                                               >  1:724515/1‑150 (MQ=255)                                                                                                     aGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTGGCAACGCCGTACAGCGCCACACCAAACGGCTGCAGGAACTCGGCCACACGCTGACCAATGTCg                                            <  2:491240/150‑1 (MQ=255)                                                                                                      gCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTGGCAACGCCGTACAGCGCCACACCAAACGGCTGCAGGAACTCGGCCACACGCTGACCAATGTCGc                                           <  2:300811/150‑1 (MQ=255)                                                                                                      gCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTGGCAACGCCGTACAGCGCCACACCAAACGGCTGCAGGAACTCGGCCACACGCTGACCAATGTCGc                                           >  1:547475/1‑150 (MQ=255)                                                                                                       cACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTGGCAACGCCGTACAGCGCCACACCAAACGGCTGCAGGAACTCGGCCACACGCTGACCAATGTCGcc                                          <  1:563362/150‑1 (MQ=255)                                                                                                          gTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGc                                                                                                                          >  2:1116520/1‑67 (MQ=255)                                                                                                          gTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGc                                                                                                                          <  1:1116520/67‑1 (MQ=255)                                                                                                                gACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTGGCAACGCCGTACAGCGCCACACCAAACGGCTGCAGGAACTCGGCCACACGCTGACCAATGTCGCCTACACCcac                                 <  2:547475/150‑1 (MQ=255)                                                                                                                      gCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTGGCAACGCCGTACAGCGCCACACCAAACGGCTGCAGGAACTCGGCCACACGCTGACCAATGTCGCCTACACCCACAATgag                           <  1:480327/150‑1 (MQ=255)                                                                                                                            caaGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTGGCACCCCCGTACAGTGCCACACCAAACGGCTGCAGGAACTCGGCCACACGCTGACCAATGTCGCCTACACCCACAATGAGAACCtt                     <  2:1190233/150‑1 (MQ=255)                                                                                                                                               aGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTGGCAACGCCGTACAGCGCCACACCAAACGGCTGCAGGAACTCGGCCACACGCTGACCAATGTCGCCTACACCCACAATGAGAACCTTGCGCCCTTCCAGGCTgcgc  <  1:324562/150‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                    ACCACGCCCGGCATTGATGAACAAGGCCGAGGGCTGGAAGCATTTGAACAGCGCGGCGTCATACAGGTCATGAGTCGCCGGGGTATCCGGCAGCAGGTTCAGCACGTAGTCGACCTGGCCAACCAAGCGCGGCAGGTCGGCCAGCGCCGCCACCTCGACGAACGGCGCCTGCTCACGGGCGCTGCTGGCAACGCCGTACAGCGCCACACCAAACGGCTGCAGGAACTCGGCCACACGCTGACCAATGTCGCCTACACCCACAATGAGAACCTTGCGCCCTTCCAGGCTGCGC  >  NC_002947/5208079‑5208370

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.