New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5936806 | 57 (1.260) | 3 (0.070) | 3/234 | NT | 5.4% | coding (267/960 nt) | yhiI | translation‑like protein |
? | NC_002947 | = 5936823 | 51 (1.200) | coding (284/960 nt) | yhiI | translation‑like protein |
GCCACCGAAGTGCAGATCGCCAGCAAGATCCCCGGTCGCCTGGCCGAAGTACTGGTCGATGAAGGCGACAACGTGATCCGTGGCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAACTGCTGTTGGCCAGCCAGGAGCTCAAGCGCGTACGCGAAATCTTCCAGCGCAAGTTCGCCAGCCAGCAGTTGCTC > NC_002947/5936675‑5936959 | gCCACCGAAGTGCAGATCGCCAGCAAGATCCCCGGTCGCCTGGCCGAAGTACTGGTCGATGAAGGCGACAACATCGACCGGGTCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTg < 1:1051460‑M2/150‑2 (MQ=255) cACCGAAGTGCAGATCGCCAGCAAGATCCCCGGTCGCCTGGCCGAAGTACTGGTCGATGAAGGCGACAACGTGATCCGTGGCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTgct < 2:13290‑M2/150‑4 (MQ=255) ccGAAGTGCAGATCGCCAGCAAGATCCCCGGTCGCCTGGCCGAAGTACTGGTCGATGAAGGCGACAACGTGATCCGTGGCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTgctgc < 2:457471‑M2/150‑6 (MQ=255) ccGAAGTGCAGATCGCCAGCAAGATCCCCGGTCGCCTGGCCGAAGTACTGGTCGATGAAGGCGACAACGTGATCCGTGGCCAGCTACTGGCGCACCTCGACACCCGCACCATGGAGTCCCAGCGCATCCATGCCGAAGGCGAAGTgctgc > 2:919816‑M2/1‑145 (MQ=255) gCAGATCGCCAGCAAGATCCCCGGTCGCCTGGCCGAAGTACTGGTCGATGAAGGCGACAACGTGATCCGTGGCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCg < 1:331199/150‑1 (MQ=255) cAGATCGCCAGCAAGATCCCCGGTCGCCTGGCCGAAGTACTGGTCGATGAAGGCGACAACGTGATCCGTGGCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCgg > 1:168284/1‑150 (MQ=255) cGCCAGCAAGATCCCCGGTCGCCTGGCCGAAGTACTGGGCGATGAAGGCGACAACGTGATCCGTGGCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGaaaa < 1:636287/150‑1 (MQ=255) gCCAGCAAGATCCCCGGTCGCCTGGCCGAAGTACTGGTCGATGAAGGCGACAACGTGATCCGTGGCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAAc > 2:935771/1‑150 (MQ=255) cAGCAAGATCCCCGGTCGCCTGGCCGAAGTACTGGTCGATGAAGGCGACAACGTGATCCGTGGCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTa > 2:272211/1‑150 (MQ=255) cGGTCGCCTGGCCGAAGTACTGGTCGATGAAGGCGACAACGTGATCCGTGGCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGcaca < 1:683125/150‑1 (MQ=255) tCGCCTGGCCGAAGTACTGGTCGATGAAGGCGACAACGTGATCCGTGGCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGc < 2:967048/150‑1 (MQ=255) ccTGGCCGAAGTACTGGTCGATGAAGGCGACAACGTGATCCGTGGTCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAg > 2:1138154/1‑150 (MQ=255) cTGGCCGAAGTACTGGTCGATGAAGGCGACAACGTGATCCGTGGCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGc > 2:393878/1‑150 (MQ=255) cGAAGTACTGGTCGATGAAGGCGACAACGTGATCCGTGGCCAGCTACTGGCGCGCATCGACGCCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCa > 1:847743/1‑150 (MQ=255) cGAAGTACTGGTCGATGAAGGCGACAACGTGATCCGTGGCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCa > 2:661659/1‑150 (MQ=255) tACTGGTCGATGAAGGCGACAACGTGATCCGTGGCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTgc < 1:935771/150‑1 (MQ=255) tGGTCGATGAAGGCGACAACGTGATCCGTGGCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGcc > 1:405526/1‑150 (MQ=255) gTCGATGAAGGCGACAACGTGATCCGTGGCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGGCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAACCTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCag > 2:346276/1‑150 (MQ=255) gAAGGCGACAACGTGATCCGTGGCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGaa < 1:457471/150‑1 (MQ=255) gAAGGCGACAACGTGATCCGTGGCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGaa < 1:661659/150‑1 (MQ=255) cGACAACGTGATCCGTGGCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAActgct > 1:1051129/1‑150 (MQ=255) cAACGTGATCCGTGGCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAACTGCTGtt < 2:1051460/150‑1 (MQ=255) aTCCGTGGCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCaga > 1:1064690/1‑130 (MQ=255) aTCCGTGGCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCaga < 2:1064690/130‑1 (MQ=255) tCCGTGGCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAACTGCTGTTGgccagcc > 2:825041/1‑150 (MQ=255) ccGTGGCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAACTGCTGTTGgccagcca < 2:405526/150‑1 (MQ=255) cGTGGCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAACTGCTGTTGGccagccag < 2:1051129/150‑1 (MQ=255) tGGCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTAcgccgccg < 2:504612/98‑1 (MQ=255) tGGCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTAcgccgccg > 1:504612/1‑98 (MQ=255) tGGCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGACGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACANGCCAGCGTGCAACTGCGCCAGAGTGAACTGCTGTTGGCCAGCCAGGa < 1:351085/150‑1 (MQ=255) gCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAACTGCTGTTGGCCAGCCAGGAGc > 2:816934/1‑150 (MQ=255) tACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAACTGCTGTTGGCCAGCCAGGAGCTCAAgc > 2:1029869/1‑150 (MQ=255) gcgcgcATCGACACCCGCACCATGGAAGCAGAGGGCGGCCGGGCCGAATGCTAAGGGCTGCGCGCCCGGGAAGACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAACTGCTGTTGGCCAGCCAGACGCGTAAGCGCGTa > 1:688094/1‑150 (MQ=255) cgcgcATCGACGCCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAACTGCTGTTGGCCAGCCAGGAGCTCAAGCGCGTAc < 2:847743/150‑1 (MQ=255) cgcATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAACTGCTGTTGGCCAGCCAGGAGCTCAAGCGCGTAcgc < 2:619308/150‑1 (MQ=255) gcATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAACACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGACCTGCTGTTGGCCAGCCAGGCGCCCACGCCGCTAcgcg > 2:67267/1‑150 (MQ=255) cATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAACTGCTGTTGGCCAGCCAGGAGCTCAAGCGCGTACGCGa > 1:755357/1‑150 (MQ=255) aTCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAACTGCTGTTGGCCAGCCAGGAGCTCAAGCGCGTACGCGaa > 2:28441/1‑150 (MQ=255) aTCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAACTGCTGTTGGCCAGCCAGGAGCTCAAGCGCGTACGCGaa > 1:177614/1‑150 (MQ=255) tCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAACTGCTGTTGGCCAGCCAGGAGCTCAAGCGCGTACGCGaaa < 1:799759/150‑1 (MQ=255) acacCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTgctgc > 2:1036133‑M2/1‑46 (MQ=255) acacCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTgctgc < 1:1036133‑M2/51‑6 (MQ=255) cacCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTCCGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAACTGCTGTTGGCCAGCCAGGAGCTCAAGCGCGTACGCGAAATCtt < 1:1138154/150‑1 (MQ=255) acCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAAATCACCGCGTATGAATGGGTGTTGGCCAGCCAGGAGCGCAAGCGCGTACTCGAAATCTTc < 2:168284/150‑1 (MQ=255) ccGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAACTGCTGTTGGccagccag > 1:636385/1‑121 (MQ=255) ccGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAACTGCTGTTGGccagccag < 2:636385/121‑1 (MQ=255) ccGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAACTGCTGTTGGCCAGCCAGGAGc > 1:697084/1‑125 (MQ=255) ccGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAACTGCTGTTGGCCAGCCAGGAGc < 2:697084/125‑1 (MQ=255) ccGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAACTGCTGTTGGCCAGCCAGGAGCTCAAGCGCGTACGCGAAATCTTCCa < 2:177614/150‑1 (MQ=255) gCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAACTGCTGTTGGCCAGCCAGGAGCTCAAGCGCGTACGCGAAATCTTCCAgc < 1:393878/150‑1 (MQ=255) ccATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAACACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAACTGCTGTTGGCCAGCCAGGAGCTCAAGCGCGTACGCGAAATCTTCCAGCGCa > 1:817428/1‑150 (MQ=255) aTGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTgctgcgctgggcttccatggtgcgggtgtcgatgcgcgccagtagctggccacggatcacgttgtcgccttcatcgatcagtacttcggccaggcgaccggggatcttgctggcg < 1:63571‑M2/150‑116 (MQ=255) aaGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAActgct > 2:877837/1‑97 (MQ=255) aaGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAActgct < 1:877837/97‑1 (MQ=255) aGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAACTGCTGTTGGCCAGCCAGGAGCTCAAGCGCGTACGCGAAATCTTCCAGCGCAAGTTCgc < 2:65635/150‑1 (MQ=255) cccAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAACTGCTGTTGGCCAGCCAGGAGCTCAAGCGCGTACGCGAAATCTTCCAGCGCAAGTTCgcca < 1:272211/150‑1 (MQ=255) ccAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAACTGCTGTTGGCCAGCCAGGAGCTCAAGCGCGtcggc > 1:512/1‑120 (MQ=255) ccAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAACTGCTGTTGGCCAGCCAGGAGCTCAAGCGCGTAcgc < 2:512/124‑1 (MQ=255) ccAGGCCGAAGCCGAAGTgctgcgctgggcttccatggtgcgggtgtcgatgcgcgccagtagctggccacggatcacgttgt < 2:639888‑M2/83‑66 (MQ=255) ccAGGCCGAAGCCGAAGTgctgcgctgggcttccatggtgcgggtgtcgatgcgcgccagtagctggccacggatcacgttgt > 1:639888‑M2/1‑18 (MQ=255) gccgaagccgaaGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAACTGCTGTTGGCCAGCCAGGAGCTCAAGCGCGTACGCGAAATCTTCCAGCGCAAGTTCGCCAGCCAGCAGTTGCTc < 2:280327/150‑1 (MQ=255) | GCCACCGAAGTGCAGATCGCCAGCAAGATCCCCGGTCGCCTGGCCGAAGTACTGGTCGATGAAGGCGACAACGTGATCCGTGGCCAGCTACTGGCGCGCATCGACACCCGCACCATGGAAGCCCAGCGCAGCCAGGCCGAAGCCGAAGTGCTGCGCGCCCGGGAAAACTACGCCGCCGCACAGGCCAGCGTGCAACTGCGCCAGAGTGAACTGCTGTTGGCCAGCCAGGAGCTCAAGCGCGTACGCGAAATCTTCCAGCGCAAGTTCGCCAGCCAGCAGTTGCTC > NC_002947/5936675‑5936959 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |