Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	990,700	T→A	6.3%	L193Q (CTG→CAG)	PP_0856 →	lipoprotein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	990,700	0	T	A	6.3%	189.8 / 3.2	63	L193Q (CTG→CAG)	PP_0856	lipoprotein
Reads supporting (aligned to +/- strand):  ref base T (26/33);  new base A (2/2);  total (28/35)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.25e-01

AACAACGGTGACGTGGTGGTGGTGCAGACCCAGGACGATCGCCTGATCGGCCTGGATGCCGCCACTGGCGACCGCCGTTGGATCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGGTGTGC‑CGGTGTGGGAGAGCCGCGTGGCCATCCCGAAGGGCCGTTCCGAGCTGGACCGTGTGGTTGATATCGACGGCGGCTTGTTGCTGTCTGGT  >  NC_002947/990552‑990848                                                                                                                                                     |                                                                                                                                                      aacaacGGTGACGTGGTGGTGGTGCAGACCCAGGACGATCGCCTGATCGGCCTGGATGCCGCCACTGGCGACCGCCGTTGGATCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTg                                                                                                                                                      >  2:77105/1‑150 (MQ=255)   caacGGTGACGTGGTGGTGGTGCAGACCCAGGACGATCGCCTGATCGGCCTGGATGCCGCCACTGGCGACCGCCGTTGGATCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGc                                                                                                                                                    <  1:1034362/150‑1 (MQ=255)         tGACGTGGTGGTGGTGCAGACCCAGGACGATCGCCTGATCGGCCTGGATGCCGCCACTGGCGACCGCCGTTGGATCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGc                                                                                                                                              <  2:182157/150‑1 (MQ=255)          gcagtggagctggtgCAGACCCACAACGGTCGCCGGATCGGCGTGGATGCCGCCACTGGCGACCGCCGTTGGATCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTggt                                                                                                                                             <  2:1164463/147‑3 (MQ=255)          gACGTGGTGGTGGTGCAGACCCAGGACGATCGCCTGATCGGCCTGGATGCCGCCACTGGCGACCGCCGTTGGATCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCAGGCGGTTggt                                                                                                                                             <  1:423654/150‑3 (MQ=255)           aCGTGGTGGTGGTGCAGACCCAGGACGATCGCCTGATCGGCCTGGATGCCGCCACTGGCGACCGCCGTTGGATCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCAGGCGGTTggtg                                                                                                                                            <  2:183211/150‑4 (MQ=255)             gtggtggtggtgCAGACCCAGGACGATCGCCTGATCGGCCTGGATGCCGCCACTGGCGACCGCCGTTGGATCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGc                                                                                                                                          <  1:115323/150‑1 (MQ=255)               ggtggtggtgCAGACCCAGGACGATCTCCTGATCGGCCTGGATGCCGCCACTGGCGACCGCCGTTGGATCTACTAAAACTCGCCGGCCGTTCTGACGCTGCTTGGCACCGGTGCTCCTATCGCCACCAACCGCCTGGCGGTTGCCGGCCt                                                                                                                                        <  1:211377/150‑1 (MQ=255)                   gtggtgCAGACCCAGGACGATCGCCTGATCGGCCTGGATGCCGCCACTGGCGACCGCCGTTGGATCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCg                                                                                                                                                   >  2:231956/1‑135 (MQ=255)                   gtggtgCAGACCCAGGACGATCGCCTGATCGGCCTGGATGCCGCCACTGGCGACCGCCGTTGGATCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCg                                                                                                                                                   <  1:231956/135‑1 (MQ=255)                     ggtgCAGACCCAGGACGATCGCCTGATCGGCCTGGATGCCGCCACTGGCGAGCGCCGTTGGATCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTAc                                                                                                                                  <  2:464627/150‑1 (MQ=255)                          aGACCCAGGACGATCGCCTGATCGGCCTGGATGCCGCCACTGGCGACCGCCGTTGGATCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCa                                                                                                                             <  1:1064765/150‑1 (MQ=255)                           gACCCAGGACGATCGCCTGATCGGCCTGGATGCCGCCACTGGCGACCGCCGTTGGATCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCaa                                                                                                                            <  2:1153980/150‑1 (MQ=255)                           gACCCAGGACGATCGCCTGATCGGCCTGGATGCCGCCACTGGCGACCGCCGTTGGATCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCaa                                                                                                                            >  1:59072/1‑150 (MQ=255)                                aGGACGATCGCCTGATCGGCCTGGATGCCGCCACTGGCGACCGCCGTTGGATCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAg                                                                                                                       >  1:944949/1‑150 (MQ=255)                                  gACGATCGCCTGATCGGCCTGGATGCCGCCACTGGCGACCGCCGTTGGATCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTg                                                                                                                     >  2:851633/1‑150 (MQ=255)                                          ccTGATCGGCCTGGATGCCGCCACTGGCGACCGCCGTTGGATCTACGAAAACTCGCCGCCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGa                                                                                                             >  2:1058938/1‑150 (MQ=255)                                             gATCGGCCTGGATGCCGCCACTGGCGACCGCCGTTGGATCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACAt                                                                                                          >  2:968798/1‑150 (MQ=255)                                              aTCGGCCTGGATGCCGCCACTGGCGACCGCCGTTGGATCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATc                                                                                                         <  1:1034390/150‑1 (MQ=255)                                               tCGGCCTGGATGCCGCCACTGGCGACCGCCGTTGGATCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATca                                                                                                        <  1:77105/150‑1 (MQ=255)                                                 ggCCTGGATGCCGCCACTGGCGACCGCCGTTGGATCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATcaac                                                                                                      >  2:196528/1‑150 (MQ=255)                                                   ccTGGATGCCGCCACTGGCGACCGCCGTTGGATCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATcaacaa                                                                                                    <  1:644043/150‑1 (MQ=255)                                                    cTGGATGCCGCCACTGGCGACCGCCGTTGGATCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCaacaac                                                                                                   >  1:1088691/1‑150 (MQ=255)                                                       gATGCCGCCACTGGCGACCGCCGTTGGATCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGgt                                                                                                <  1:851633/150‑1 (MQ=255)                                                            cgccACTGGCGACCGCCGTTGGATCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGGTGTGc‑c                                                                                          >  1:941409/1‑150 (MQ=255)                                                             gccACTGGCGACCGCCGTTGGATCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGGTGTGC‑Cg                                                                                         <  2:1088691/150‑1 (MQ=255)                                                                 cTGGCGACCGCCGTTGGATCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGGTGTGC‑CGgtgt                                                                                     <  2:1028329/150‑1 (MQ=255)                                                                   ggCGACCGCCGTTGGATCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGGTGTGC‑CGGTGTgg                                                                                   <  2:1017164/150‑1 (MQ=255)                                                                   ggCGACCGCCGTTGGATCTACGAAAACTCGCCGCCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGGTGTGC‑CGGTGTgg                                                                                   <  1:1058938/150‑1 (MQ=255)                                                                                 gATCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGGTGTGC‑CGGTGTGGGAGAGCCGCGTGGc                                                                     >  2:332380/1‑150 (MQ=255)                                                                                  aTCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGt                                                                                                                <  1:185994/107‑1 (MQ=255)                                                                                  aTCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGt                                                                                                                >  2:185994/1‑107 (MQ=255)                                                                                    cTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGGTGTGC‑CGGTGTGGGAGAGCCGCGTGGCCAt                                                                  <  2:469093/150‑1 (MQ=255)                                                                                       cGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATcaacaa                                                                                                    >  1:649787/1‑114 (MQ=255)                                                                                       cGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATcaacaa                                                                                                    <  2:649787/114‑1 (MQ=255)                                                                                        gAAAACTCGCGGGCCGTGCTGACGCTGCGTGGCGCCGGGGCGGCGATCACCACCGACCGGCTGGCGGTTGAGGGCCTGGCTACGGGCAAGGGAGTGGAGGTGGACATCAACCACGGTGTGC‑CGGTGTGGGAGAGCAGAGTGGCCATCCCg                                                              >  2:262876/1‑150 (MQ=255)                                                                                        gAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGGTGTGC‑CGGTGTGGGAGAGCCGCGTGGCCATCCCg                                                              >  2:927905/1‑150 (MQ=255)                                                                                        gAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGGTGTGC‑CGGTGTGGGAGAGCCGCGTGGCCATCCCg                                                              >  1:576492/1‑150 (MQ=255)                                                                                           aaCTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACCCCGGTGTGC‑CGGTGTGGGAGAGCCGCGTGGCCATCCCGAAg                                                           <  2:978711/150‑1 (MQ=255)                                                                                              tCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGGTGTGC‑CGGTGTGGGAGAGCCGCGTGGCCATCCCGAAGGGc                                                        >  2:743331/1‑150 (MQ=255)                                                                                                  cggccgTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGGGGCGGTGGACATCAACAACGGTGTGC‑CGGTGTGGGAGAGCCGCGTGGCCATCCCGAAGGGCCGtt                                                    >  2:462505/1‑150 (MQ=255)                                                                                                    gccgTGCTGACGCTGCGTGGAACCGGTGAGTGGATGGCCACCAACCGCCTGGCGGGTGCCGGACTGTCGACCGGCAAGGTAGTGGCGGTGGACATCAACAACGGAGTGC‑CGGTGTGGGAGGACCGCTTGGCCATCCCGAAGGGCCGTTcc                                                  >  1:222393/1‑150 (MQ=255)                                                                                                      cgTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCGCGCTACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGGTGTGC‑CGGTGTGGGAGAGCCGCGTGGCCATCCCGAAGGGCCGTTCCGa                                                <  1:968365/150‑1 (MQ=255)                                                                                                             aCGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGGTGTGC‑CGGTGTGGGAGAGCCGCGTGGCCATCCCGAAGGGCCGTTCCGAGCTGGAc                                         >  1:1094157/1‑150 (MQ=255)                                                                                                               gCTGCGTGGCACCGGTGCGCCGAGCGCCACCAACCGCCTGGCGGGTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGGTGTGC‑CGGTGTGGGAGAGCCGCGTGGCCATCCCGAAGGGCCGTTCCGAGCTGGACCg                                       >  2:15342/1‑150 (MQ=255)                                                                                                                    gTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGGAAGGTAGTGGCGGTGGACATCAACAACGGTGTGC‑CGGTGTGGGAGAGCCGCGTGGCCATCCCGAAGGGCCGTTCCGAGCTGGACCGTGTgg                                  >  2:645177/1‑150 (MQ=255)                                                                                                                      ggCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGGTGTGC‑CGGTGTGGGAGAGCCGCGTGGCCATCCCGAAGGGCCGTTCCGAGCTGGACCGTGTGGtt                                <  1:743331/150‑1 (MQ=255)                                                                                                                       gCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGGTGTGC‑CGGTGTGGGAGAGCCGCGTGGCCATCCCGAAGGGCCGTTCCGAGCTGGACCGTGTGGtt                                >  2:1190033/1‑149 (MQ=255)                                                                                                                       gCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGGTGTGC‑CGGTGTGGGAGAGCCGCGTGGCCATCCCGAAGGGCCGTTCCGAGCTGGACCGTGTGGtt                                <  1:1190033/149‑1 (MQ=255)                                                                                                                         aCCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGgtgt                                                                                              >  2:379251/1‑86 (MQ=255)                                                                                                                         aCCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGgtgt                                                                                              <  1:379251/86‑1 (MQ=255)                                                                                                                         aCCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGGTGTGC‑CGGTGTGGGAGAGCCGCGTGGCCATCCCGAAGGGCCGTTCCGAGCTGGACCGTGTGGTTGat                             <  2:1094157/150‑1 (MQ=255)                                                                                                                             gTGCGCCGATCGCCACCAACCGCCTGACGGTTACAAGCCTGTCGACTTGCAAGGTGGTGGCAATGGACATTAA‑AACGCCAGGTTCGGCTTACAACGACCGCGTGGCCATCCCGAAGGGCCGTTCCGAGCTGGACGGTGTTGTTGATATCg                         >  1:575242/1‑150 (MQ=255)                                                                                                                                     aTCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGGTGTGC‑CGGTGTGGGAGAGCCGCGTGGCCATCCCGAAGGGCCGTTCCGAGCTGGACCGTGTGGTTGATATCGACggcggc                 <  2:575242/150‑1 (MQ=255)                                                                                                                                       cGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAAGAACGGTGTGC‑CGGTGTGCGAGAACCGCGTGGCCATCCCGAAGGGCCGTTCCGCGCTGGATCGTGTGGTTGATATCGACGGCGGCtt               <  1:221040/150‑1 (MQ=255)                                                                                                                                         ccaccaACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGGTGTGC‑CGGTGTGGGAGAGCCGCGTGGCCATCCCGAAGGGCCGTTCCGAGCTGGACCGTGTGGTTGATATCGACGGCGGCttgt             <  2:59072/150‑1 (MQ=255)                                                                                                                                          cggcaACCGCCAGGCGGTTGGTGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGGTGTGC‑CGGTGTGGGAGAGCCGCGTGGCCATCCCGAAGGGCCGTTCCGAGCTGGACCGTGTGGTTGATATCGACGGCGGCttgtt            >  1:507584/4‑150 (MQ=255)                                                                                                                                          caccaACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGGTGTGC‑CGGTGTGGGAGAGCCGCGTGGCCATCCCGAAGGGCCGTTCCGAGCTGGACCGTGTGGTTGATATCGACGGCGGCttgtt            <  1:196528/150‑1 (MQ=255)                                                                                                                                           ggcaACCGCCAGGCGGTTGGTGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGGTGTGC‑CGGTGTGGGAGAGCCGCGTGGCCATCCCGAAGGGCCGTTCCGAGCTGGACCGTGTGGTTGATATCGACGGCGGCttgttg           >  2:86893/3‑150 (MQ=255)                                                                                                                                             caACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGGTGTGC‑CGGTGTGGGAGAGCCGCGTGGCCATCCCGAAGGGCCGTTCCGAGc                                              <  2:196937/113‑1 (MQ=255)                                                                                                                                             caACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGGTGTGC‑CGGTGTGGGAGAGCCGCGTGGCCATCCCGAAGGGCCGTTCCGAGc                                              >  1:196937/1‑113 (MQ=255)                                                                                                                                                ccGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGGTGTGC‑CGGTGTGGGAGAGCCGCGTGGCCATCCCGAAGGGCCGTTCCGAGCTGGACCGTGTGGTTGATATCGACGGCGGCTTGTTGCTGTc      <  1:332380/150‑1 (MQ=255)                                                                                                                                                    cTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGGTGTGC‑CGGTGTGGGAGAGCCGCGTGGCCATCCCGAAGGGCCGTTCCGAGCTGGACCGTGTGGTTGATATCGACGGCGGCTTGTTGCTGTCtggt  <  2:941409/150‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                      AACAACGGTGACGTGGTGGTGGTGCAGACCCAGGACGATCGCCTGATCGGCCTGGATGCCGCCACTGGCGACCGCCGTTGGATCTACGAAAACTCGCCGGCCGTGCTGACGCTGCGTGGCACCGGTGCGCCGATCGCCACCAACCGCCTGGCGGTTGCCGGCCTGTCTACCGGCAAGGTAGTGGCGGTGGACATCAACAACGGTGTGC‑CGGTGTGGGAGAGCCGCGTGGCCATCCCGAAGGGCCGTTCCGAGCTGGACCGTGTGGTTGATATCGACGGCGGCTTGTTGCTGTCTGGT  >  NC_002947/990552‑990848

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑