Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,580,646 C→T 12.7% V265I (GTC→ATC)  ttgB ← efflux pump membrane protein TtgB

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,580,6460CT12.7% 153.8 / 13.9 63V265I (GTC→ATC) ttgBefflux pump membrane protein TtgB
Reads supporting (aligned to +/- strand):  ref base C (28/27);  new base T (4/4);  total (32/31)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.07e-01

AGGCCTTTGATGGTCTCGCGCAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAGGGCTGGCAGGCCGCCGAGCTGGCCGGAA  >  NC_002947/1580501‑1580794
                                                                                                                                                 |                                                                                                                                                    
aGGCCTTTGATGGTGTCGCGCAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCg                                                                                                                                                  >  2:523960/1‑150 (MQ=255)
  gCCTTTGATGGTCTCGCGCAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGcc                                                                                                                                                <  1:485686/150‑1 (MQ=255)
     tttGATGGTCTCGCGCAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCTCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAg                                                                                                                                             <  1:633983/150‑1 (MQ=255)
     tttGATGGTCTCGCGCAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCAACCCCCAGGCCTAGTTTGGCGACATCGGCCAg                                                                                                                                             >  1:566249/1‑150 (MQ=255)
      ttGATGGTCTCGCGCAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAgg                                                                                                                                            <  2:1154632/150‑1 (MQ=255)
       tGATGGTCTCGCGCAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGgc                                                                                                                                           >  1:880649/1‑150 (MQ=255)
        gATGGTCTCGCGCAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGATGTCGCCCaagta                                                                                                                                          <  2:967089/150‑5 (MQ=255)
           ggTCTCGCGCAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCAc                                                                                                                                       <  2:1141879/150‑1 (MQ=255)
           ggTCTCGCGCAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCAc                                                                                                                                       <  1:1100327/150‑1 (MQ=255)
               tcGCGCAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCtgt                                                                                                                                   >  2:864427/1‑150 (MQ=255)
                  cgcAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGaa                                                                                                                                <  1:756103/150‑1 (MQ=255)
                  cgcAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGaa                                                                                                                                <  2:949808/150‑1 (MQ=255)
                         ccTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCtt                                                                                                                         <  2:250899/150‑1 (MQ=255)
                          cTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCttt                                                                                                                        <  1:440810/150‑1 (MQ=255)
                           ttGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTttg                                                                                                                       <  1:1073426/150‑1 (MQ=255)
                               cGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGa                                                                                                                   <  2:785887/150‑1 (MQ=255)
                                      cAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAg                                                                                                            >  2:137778/1‑150 (MQ=255)
                                        gcgcGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGt                                                                                                                            >  2:164164/1‑132 (MQ=255)
                                        gcgcGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGt                                                                                                                            <  1:164164/132‑1 (MQ=255)
                                             ttGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATa                                                                                                     >  2:1028741/1‑150 (MQ=255)
                                                  gcCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCtgt                                                                                                                                   <  1:529845/115‑1 (MQ=255)
                                                  gcCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCtgt                                                                                                                                   >  2:529845/1‑115 (MQ=255)
                                                       ttGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACt                                                                                           <  1:137778/150‑1 (MQ=255)
                                                       ttGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACt                                                                                           >  2:643334/1‑150 (MQ=255)
                                                          ccAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCt                                                                                        >  1:706194/1‑150 (MQ=255)
                                                            aGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTcg                                                                                      >  1:1007401/1‑150 (MQ=255)
                                                                     gCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGc                                                                             >  1:1145298/1‑150 (MQ=255)
                                                                              gAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTc                                                                    >  1:769357/1‑150 (MQ=255)
                                                                                aGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCtt                                                                  <  1:523960/150‑1 (MQ=255)
                                                                                           cGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGAtgg                                                       <  1:1035378/150‑1 (MQ=255)
                                                                                            gTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGAtggt                                                      <  1:864427/150‑1 (MQ=255)
                                                                                             ttGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGAtggtg                                                     <  1:1028741/150‑1 (MQ=255)
                                                                                             ttGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGAtggtg                                                     <  1:1179854/150‑1 (MQ=255)
                                                                                                  cTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGtt                                                >  1:1119289/1‑150 (MQ=255)
                                                                                                     ggCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACAGTCGTTGTTGACCTTGAGCGGGATACGCTCGAACGGCTCGGCGGGTTTCGGTCGGTGTGTGCCGATGAGGGTGGCGTTCAg                                             >  2:253972/1‑150 (MQ=255)
                                                                                                         cTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTgg                                         >  1:1117709/1‑150 (MQ=255)
                                                                                                         cTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTgg                                         <  2:396785/150‑1 (MQ=255)
                                                                                                          tGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGttt                                                                               <  1:538340/111‑1 (MQ=255)
                                                                                                          tGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGttt                                                                               >  2:538340/1‑111 (MQ=255)
                                                                                                                cGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCg                                  >  1:506044/1‑150 (MQ=255)
                                                                                                                 gTAGTCTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCgg                                 <  1:643334/150‑1 (MQ=255)
                                                                                                                    gTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAg                              <  2:566249/150‑1 (MQ=255)
                                                                                                                     ttttCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAgg                             >  1:325268/1‑150 (MQ=255)
                                                                                                                     ttttCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAgg                             >  2:853313/1‑150 (MQ=255)
                                                                                                                         cACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAGGGCTg                         >  1:467865/1‑150 (MQ=255)
                                                                                                                          aCCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAGGGCTgg                        >  1:760263/1‑150 (MQ=255)
                                                                                                                            cccccAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAGGGCTGGCa                      >  1:923175/1‑150 (MQ=255)
                                                                                                                              cccAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAGGGCTGGCAgg                    >  2:1033899/1‑150 (MQ=255)
                                                                                                                              cccAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAGGGCTGGCAgg                    <  1:853313/150‑1 (MQ=255)
                                                                                                                               ccAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAGGGCTGGCAGgc                   >  1:338166/1‑150 (MQ=255)
                                                                                                                                 aGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAGGGCTGGCAGgccg                 >  2:283329/1‑150 (MQ=255)
                                                                                                                                       gcctGGGCGATGTCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCgg                                                                       >  1:895083/4‑90 (MQ=255)
                                                                                                                                       gcctGGGCGATGTCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCgg                                                                       <  2:895083/87‑1 (MQ=255)
                                                                                                                                         ttGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAGGGCTGGCAgg                    >  1:268178/1‑139 (MQ=255)
                                                                                                                                         ttGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAGGGCTGGCAgg                    <  2:268178/139‑1 (MQ=255)
                                                                                                                                         ctGGGCGATGTCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCt                                                                                        >  2:42030/2‑71 (MQ=255)
                                                                                                                                         ctGGGCGATGTCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAGGGCTGGCAGGCCGCCGAGCTg         >  1:814208/2‑150 (MQ=255)
                                                                                                                                         ctGGGCGATGTCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAAATggt                                                                                        <  1:42030/70‑3 (MQ=255)
                                                                                                                                          tGGGCGATGTCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTgc                                                                                                             >  1:1059981/1‑48 (MQ=255)
                                                                                                                                          tGGGCGATGTCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTgc                                                                                                             <  2:1059981/49‑2 (MQ=255)
                                                                                                                                             gCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAGGGCTGGCAGGCCGCCGAGCTGGCCg     <  1:1033899/150‑1 (MQ=255)
                                                                                                                                               gACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAGGGCTGGCAGGCCGCCGAGCTGGCCGGa   >  1:289516/1‑150 (MQ=255)
                                                                                                                                                aCATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAGGGCTGGCAGGCCGCCGAGCTGGCCGGaa  <  2:1119289/150‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
AGGCCTTTGATGGTCTCGCGCAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCCCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAGGGCTGGCAGGCCGCCGAGCTGGCCGGAA  >  NC_002947/1580501‑1580794

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: