| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,349,081 | C→A | 5.7% | intergenic (‑402/+72) | PP_3820 ← / ← galU | group II intron‑encoding maturase/UTP‑glucose‑1‑phosphate uridylyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,349,081 | 0 | C | A | 5.7% | 221.8 / 2.6 | 72 | intergenic (‑402/+72) | PP_3820/galU | group II intron‑encoding maturase/UTP‑glucose‑1‑phosphate uridylyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (34/32); new base A (2/2); total (37/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.12e-01 | |||||||||||
GCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAGCACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTAAGCCTTGCCAGTCTTGTAGTAGTTCTCGAAGCAGAAGTTGGTCGCGTCGATGTAGCCTTCGGCGCCAC > NC_002947/4348934‑4349226 | gCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAGCACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTAcgc < 1:658744/150‑1 (MQ=32) cTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAGCACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATg > 2:345112/1‑150 (MQ=32) tCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAGCACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGc < 2:1175170/150‑1 (MQ=32) tCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAGCACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCGTAAGCGCAAccc < 1:578245/143‑3 (MQ=12) tCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAGCACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCGTAAGCGCAAccc > 2:578245/1‑141 (MQ=12) ttcAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAGCACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCCTGCCTGGCGcaca > 2:426482/1‑150 (MQ=17) ttcAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAGCACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGcaca > 1:1202592/1‑150 (MQ=32) ttcAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAGCACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGcaca > 2:232024/1‑150 (MQ=32) ccgatctcccGCGACACCCTTGCCTCCGGCTAGCACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGc < 1:1075823/143‑1 (MQ=17) cACCCGCGACACCCTTGCCTCCGGCTAGCACTTCCCCTTGCCGGGTGGGTATCAGGCGTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGAGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCAccc > 1:688414/1‑150 (MQ=11) aCCCGCGACACCCTTGCCTCCGGCTAGCACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACCTGGCCACCACAACCACGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCAcccc < 2:856302/150‑1 (MQ=25) ccGCGACACCCTTGCCTCCGGCTAGCACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGa > 1:562814/1‑150 (MQ=38) acacCCTTGCCTCCGGCTAGCACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGAt < 1:201969/150‑1 (MQ=255) acacCCTTGCCTCCGGCTAGCACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGAt < 2:641858/150‑1 (MQ=255) cccTTGCCTCCGGCTAGCACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGc > 1:847481/1‑150 (MQ=255) ccTTGCCTCCGGCTAGCACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCt < 2:1202592/150‑1 (MQ=255) gCCTCCGGCTAGCACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGa < 2:562814/150‑1 (MQ=255) ccTCCGGCTAGCACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAg < 1:359156/150‑1 (MQ=255) tCCGGCTAGCACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGc > 2:661783/1‑150 (MQ=255) cACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGc > 1:960395/1‑150 (MQ=255) cTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCtt > 1:167677/1‑150 (MQ=255) tCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTTAGGCCAGCAGGGCTTaa > 2:970777/1‑149 (MQ=255) tCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTAt < 2:511360/150‑1 (MQ=255) ccccTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATc > 2:639760/1‑150 (MQ=255) ccTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAggg < 2:254079/142‑1 (MQ=255) ccTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAggg > 1:254079/1‑142 (MQ=255) cTTGCCGGGTGTGTAGAGGACTTTGACCTCCAAGTCACCAACTTGGACACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCACCATTCCTGGCGTACACAAAAAAGCCACACCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGt > 2:440092/1‑150 (MQ=18) ttGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCAGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTa > 2:1194676/1‑150 (MQ=255) tGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTaa < 2:847481/150‑1 (MQ=255) cGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTAAGcc < 1:661783/150‑1 (MQ=255) gggTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTAAGCCt > 2:195253/1‑150 (MQ=255) tgtgtAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTAAGCCTTGc < 1:232024/150‑1 (MQ=255) tAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAggg < 1:545807/128‑1 (MQ=255) tAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAggg > 2:545807/1‑128 (MQ=255) tAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTAAGCCTTGCCAGt > 1:733400/1‑150 (MQ=255) agagGACTTTCACCTCCAAGTCACCCACTTGGCCACCACACCCAAGCGGGTTGCGCTTCGGCTCACCGCGCCATGCCTGGAGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTACTCAGTAAGCCTTGCCAGTc > 2:548490/1‑150 (MQ=21) agagGACTCTCACCTCCAAGTCACCCAGTTGGCCACCACACCCAAGCGGGGGGGGGGGGGGGGCAAGGCGCCATGCCCGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTAAGCCTTGCCAGTc < 2:167677/150‑1 (MQ=21) aCTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTAAGCCTTGCCAGTCTTgta < 2:463371/150‑1 (MQ=255) cTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTAAGCCTTGCCAGTCTTgtag < 1:782391/150‑1 (MQ=255) tttCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTAAGCCTTGCCAGTc > 1:973870/1‑143 (MQ=255) tttCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTAAGCCTTGCCAGTc < 2:973870/143‑1 (MQ=255) ttCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTAAGCCTTGCCAGTCTTgtagta < 1:639760/150‑1 (MQ=255) cACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTAAGCCTTGCCAGTCTTGTagtagt > 2:1090585/1‑150 (MQ=255) cTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTaa > 2:387892/1‑125 (MQ=255) cTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTaa < 1:387892/125‑1 (MQ=255) cTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTAAGCCTTGCCAGTc < 2:1017373/137‑1 (MQ=255) cTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTAAGCCTTGCCAGTc > 1:1017373/1‑137 (MQ=255) cTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTAAGCCTTGCCAGTCTTGTAGTAGTtct < 1:195253/150‑1 (MQ=255) tCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGc < 2:243623/105‑1 (MQ=255) tCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGc > 1:243623/1‑105 (MQ=255) cAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTAAGCCTTGCCAGTCTTGTAGTAGTTCTCGa > 1:1001477/1‑150 (MQ=255) aaGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTGAGCCTTGCCAGTCTTGTAGTAGTTCTCGaa > 2:483057/1‑150 (MQ=255) cccACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGAt < 1:713399/85‑1 (MQ=255) cccACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGAt > 2:713399/1‑85 (MQ=255) ccACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTAAGCCTTGCCAGTCTTGTAGTAGTTCTCGAAGCAGAAg > 1:525753/1‑150 (MQ=255) cACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCAcc > 2:1196941/1‑74 (MQ=34) cACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCAcc < 1:1196941/74‑1 (MQ=34) aCTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAGAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTGTCAGTAAGCCTTGCTAGTCTTGCAGTAGTGCTCGAAGCAGAAGtt > 2:514759/1‑150 (MQ=25) gCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTAAGCCTTGCCAGTCTTGTAGTAGTTCTCGAAGCAGAAGTTGGTcg > 2:664816/1‑150 (MQ=255) caccacAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTAAGCCTTGCCAGTCTTGTAGTAGTTCTCGAAGCAGAAGTTGGTcgcg > 1:269333/1‑150 (MQ=255) caccacAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTAAGCCTTGCCAGTCTTGTAGTAGTTCTCGAAGCAGAAGTTGGTcgcg > 2:343363/1‑150 (MQ=255) caACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTAAGCCTTGCCAGTCTTGTAGTAGTTCTCGAAGCAGAAGTTGGTCGCGTCGAt < 2:723759/150‑1 (MQ=255) caACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTAAGCCTTGCCAGTCTTGTAGTAGTTCTCGAAGCAGAAGTTGGTCGCGTCGAt < 2:960395/150‑1 (MQ=255) ccAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTAAGCCTTGCCAGTCTTGTAGTAGTTCTCGAAGCAGAAGTTGGTCGCGTCGATGTa < 1:514759/150‑1 (MQ=255) aaGTGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTAAGCCTTGCCAGTCTTGTAGTAGTACTCGAAGCAGAAGTTGGTCGCGTCGATGTAGc < 1:1009375/150‑1 (MQ=255) aaGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTAAGCCTTGCCAGTCTTGTAGTAGTTCTCGAAGCAGAAGTTGGTCGCGTCGATGTAGc < 2:1001477/150‑1 (MQ=255) aGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGc > 2:778086/1‑75 (MQ=255) aGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGc < 1:778086/75‑1 (MQ=255) gggTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCa < 1:538244/87‑1 (MQ=255) gggTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCa > 2:538244/1‑87 (MQ=255) ttGCGCGTAAGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTAAGCCTTGCCAGTCTTGTAGTAGTTCTCGAAGCAGaa < 2:779225/123‑1 (MQ=255) ttGCGCGTAAGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTAAGCCTTGCCAGTCTTGTAGTAGTTCTCGAAGCAGaa > 1:779225/1‑123 (MQ=255) cTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTAAGCCTTGCCAGTCTTGTAGTAGTTCTCGAAGCAGAAGTTGGTCGCGTCGATGTAGCCTTCGGCGCCAc < 1:345112/150‑1 (MQ=255) | GCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAGCACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACGCGCCATGCCTGGCGCACACAAAAAAGCCACCCCGAAGGATGGCTTTGAGGCCAGCAGGGCTTATCAGTAAGCCTTGCCAGTCTTGTAGTAGTTCTCGAAGCAGAAGTTGGTCGCGTCGATGTAGCCTTCGGCGCCAC > NC_002947/4348934‑4349226 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |