| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,821,183 | A→G | 5.5% | L3351S (TTG→TCG) | pvdL ← | non‑ribosomal peptide synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,821,183 | 0 | A | G | 5.5% | 225.4 / 2.0 | 72 | L3351S (TTG→TCG) | pvdL | non‑ribosomal peptide synthetase |
| Reads supporting (aligned to +/- strand): ref base A (35/33); new base G (2/2); total (37/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
CCAAGGGCCTGGTAGACCTCGAAGAAATCGTTCATCAACAGCGAGCGGCACCAGGCATCGATAAGGATGTGGTGGTTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTGGTAGTCCACCGCCAGGTTGCCCGGCTTGTGGATGATCTGCAGCATCGCCTCGCCGCTGTTCC > NC_002947/4821036‑4821330 | ccAAGGGCCTGGTAGACCTCGAAGAAATCGTTCATCAACAGCGAGCGGCACCAGGCATCGATAAGGATGTGGTGGTTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAg < 1:300332/150‑1 (MQ=255) gggCCTGGTACACCTCGAAGAAATCGTTGATAAACAGCGAGCGGCACCAGGCCTCGATAAGCATGTGGTGGTTGCTCATCATGTACCAGTAGCGTTCCTCGGCCACACGCACCAGACGCAGGTGGAACGGTGGCTCGCGGAGCAAGGCaa > 1:109390/1‑150 (MQ=255) gCCTGGTAGACCTCGAAGAAATCGTTCATCAACAGCGAGCGGCACCAGGCATCGATAAGGATGTGGTGGTTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAg > 2:117719/1‑150 (MQ=255) cTGGTAGACCTCGAAGAAATCGTTCATCAACAGCGAGCGGCACCAGGCATCGATAAGGATGTGGTGGTTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGcc < 2:445673/150‑1 (MQ=255) tAGACCTCGAAGAAATCGTTCATCAACAGCGAGCGGCACCAGGCATCGATAAGGATGTGGTGGTTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGcc < 2:58454/150‑1 (MQ=255) ccTCGAAGAAATCGTTCATCAACAGCGAGCGGCACCAGGCATCGATAAGGATGTGGTGGTTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTcgc < 1:24678/150‑1 (MQ=255) cTCGAAGAAATCGTTCATCAACAGCGAGCGGCACCAGGCATCGATAAGGATGTGGTGGTTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAgg < 1:318693/134‑1 (MQ=255) cTCGAAGAAATCGTTCATCAACAGCGAGCGGCACCAGGCATCGATAAGGATGTGGTGGTTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAgg > 2:318693/1‑134 (MQ=255) cTCGAAGAAATCGTTCATCAACAGCGAGCGGCACCAGGCATCGATAAGGATGTGGTGGTTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTcgcg > 2:727290/1‑150 (MQ=255) gTTCATCAACAGCGAGCGGCACCAGGCATCGATAAGGATGTGGTGGTTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTcc < 2:757658/142‑1 (MQ=255) gTTCATCAACAGCGAGCGGCACCAGGCATCGATAAGGATGTGGTGGTTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTcc > 1:757658/1‑142 (MQ=255) ttCATCAACAGCGAGCGGCACCAGGCATCGATAAGGATGTGGTGGTTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGc > 2:868667/1‑150 (MQ=255) atcaACAGCGAGCGGCACCAGGCATCGATAAGGATGTGGTGGTTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAgg < 1:860830/150‑1 (MQ=255) tcaACAGCGAGCGGCACCAGGCATCGATAAGGATGTGGTGGTTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTtg > 2:600785/1‑143 (MQ=255) tcaACAGCGAGCGGCACCAGGCATCGATAAGGATGTGGTGGTTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTtg < 1:600785/143‑1 (MQ=255) agcgagcgGCACCAGGCATCGATAAGGATGTGGTGGTTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGc > 1:157279/1‑150 (MQ=255) cAGGCATCGATAAGGATGTGGTGGTTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGc < 2:103854/134‑1 (MQ=255) cAGGCATCGATAAGGATGTGGTGGTTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGc > 1:103854/1‑134 (MQ=255) aGGCATCGATAAGGATGTGGTGGTTGCTCATCATGAACCAGTAACGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGCGCCTGCAGGCcctgcacaa < 1:68187/150‑5 (MQ=255) gCATCGATAAGGATGTGGTGGTTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGTTCTTTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGTTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTgg < 2:290173/150‑1 (MQ=255) gCATCGATAAGGATGTGGTGGTTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTgg > 1:603770/1‑150 (MQ=255) gATAAGGATGTGGTGGTTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCAtc < 2:603770/150‑1 (MQ=255) aTAAGGATGTGGTGGTTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGcc > 2:720187/1‑98 (MQ=255) aTAAGGATGTGGTGGTTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGcc < 1:720187/98‑1 (MQ=255) tAAGGATGTGGTGGTTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCAtcgt > 1:431439/1‑150 (MQ=255) ggATGTGGTGGTTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCgg < 2:515033/150‑1 (MQ=255) tgtgGTGGTTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTAGCGAGTGTCCTTCAGGCGCTGCTCCTGGGCATCGTCGGCCa > 2:1001877/1‑150 (MQ=255) tgtgGTGGTTGCTCATCATGAACCAGTAGCGTTAATAGGCCTTTCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCa < 2:1189101/150‑1 (MQ=255) ggtggtTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGc > 1:202414/1‑150 (MQ=255) gtggtTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTcg > 2:307937/1‑94 (MQ=255) gtggtTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTcg < 1:307937/94‑1 (MQ=255) gtggtTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGcc > 2:1110900/1‑150 (MQ=255) gtTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGCGCAAGGCAAAGCCGGCCTCGCAATACTGATGGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCcgcg > 2:32176/1‑150 (MQ=255) catcatGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTc < 2:157279/150‑1 (MQ=255) atcatGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTcc > 1:675300/1‑150 (MQ=255) atcatGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTcc > 1:277078/1‑150 (MQ=255) tcatGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCAtcgtcg < 2:1023825/131‑1 (MQ=255) tcatGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCAtcgtcg > 1:1023825/1‑131 (MQ=255) tcatGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCAGCGCCAGTCCt < 2:202698/150‑1 (MQ=255) catGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTcc > 2:1060035/1‑148 (MQ=255) catGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTcc < 1:1060035/148‑1 (MQ=255) catGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTg < 2:675300/150‑1 (MQ=255) atGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTgg < 1:117719/150‑1 (MQ=255) tGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGTCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTggc < 2:533698/150‑2 (MQ=255) gAACCAGTAGCGTTCCTCGGCCACGCGCACCCGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTcc < 1:1169222/115‑1 (MQ=255) gAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTcc > 2:1169222/1‑115 (MQ=255) aaCCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTGGTAg > 1:418650/1‑150 (MQ=255) gTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTGGTAGTCCAc > 2:208581/1‑150 (MQ=255) gTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTGGTAGTCCACCGCCa > 1:720631/1‑150 (MQ=255) gTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTGGTAGTCCACCGCCa < 1:868667/150‑1 (MQ=255) ttCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTGGTAGTCCACCGCCAg > 2:572254/1‑150 (MQ=255) tCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTGGTAGTCCACCGCCAGGTTg > 2:1155175/1‑150 (MQ=255) gcgcACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTACTTATGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTGGTAGTCCACCGCCAGGTTGCCCGGCtt > 2:293058/1‑150 (MQ=255) gcACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTGGTAGTCCACCGCCAGGTTGCCCGGCTtgt < 1:998680/150‑1 (MQ=255) gcACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTGGTAGTCCACCGCCAGGTTGCCCGGCTtgt > 1:738572/1‑150 (MQ=255) gcACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTGGTAGTCCACCGCCAGGTTGCCCGGCTtgt > 2:106687/1‑150 (MQ=255) cACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTGGTAGTCCACCGCCAGGTTGCCCGGCTtgtg < 1:106687/150‑1 (MQ=255) cACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTGGTAGTCCACCGCCAGGTTGCCCGGCTtgtg < 2:418650/150‑1 (MQ=255) aCCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTGGTAGTCCACCGCCAGGTTGCCCGGCTTGTgg > 1:321306/1‑150 (MQ=255) gcAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTGGTAGTCCACCGCCAGGTTGCCCGGCTTGTGGATGATCt < 2:525653/150‑1 (MQ=255) gAACGGTGTCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGACTCGCCAGTCCTGGTAGTCCACCGCCAGGTTGCCCGGCTTGTGGATGATCTGCAGCAt > 1:617599/1‑150 (MQ=255) gAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTgg < 1:443895/106‑1 (MQ=255) gAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTgg > 2:443895/1‑106 (MQ=255) ctttGCCTTGCTCAGCGAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTGGTAGTCCACCGcc > 2:546051/4‑115 (MQ=255) ctttGCCTTGCTCAGCGAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTGGTAGTCCACCGcc < 1:546051/112‑1 (MQ=255) gCCTTGCTCAGCGAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTGGTAGTCCACCGCCAGGTTGCCCGGCTtgtg < 1:294548/128‑1 (MQ=255) gCCTTGCTCAGCGAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTGGTAGTCCACCGCCAGGTTGCCCGGCTtgtg > 2:294548/1‑128 (MQ=255) ccTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTGGTAGTCCACCGCCAGGTTGCCCGGCTTGTGGATGATCTGCAGCAtcgcctcgc > 1:1022462/1‑150 (MQ=255) cTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTGGTAGTCCACCGCCAGGTTGCCCGGCTTGTGGATGATCTGCAGCAtcgcctcgcc < 2:738572/150‑1 (MQ=255) tGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTGGTAGTCCACCGCCAGGTTGCCCGGCTTGTGGATGATCTGCAGCAtc < 1:862291/137‑1 (MQ=255) tGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTGGTAGTCCACCGCCAGGTTGCCCGGCTTGTGGATGATCTGCAGCAtc > 2:862291/1‑137 (MQ=255) gCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTGGTAGTCCACCGCCAGGTTGCCCGGCTTGTGGATGATCTGCAGCATCGCCTCGCCGCTGTTcc < 1:727290/150‑1 (MQ=255) | CCAAGGGCCTGGTAGACCTCGAAGAAATCGTTCATCAACAGCGAGCGGCACCAGGCATCGATAAGGATGTGGTGGTTGCTCATCATGAACCAGTAGCGTTCCTCGGCCACGCGCACCAGGCGCAGGTGGAACGGTGCCTCGCTGAGCAAGGCAAAGCCGGCCTCGCGCTCCTGCTTGTGCAGGGCCTGCAGGCGCTGCTCCTGGGCATCGTCGGCCAGGCCGCGCCAGTCCTGGTAGTCCACCGCCAGGTTGCCCGGCTTGTGGATGATCTGCAGCATCGCCTCGCCGCTGTTCC > NC_002947/4821036‑4821330 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |