| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,957,744 | C→G | 5.8% | G334A (GGC→GCC) | fliG ← | flagellar motor switch protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,957,744 | 0 | C | G | 5.8% | 214.8 / 2.7 | 69 | G334A (GGC→GCC) | fliG | flagellar motor switch protein |
| Reads supporting (aligned to +/- strand): ref base C (38/27); new base G (2/2); total (40/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.92e-01 | |||||||||||
TCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCACGTCGCTGACCCGTACCGGCCCTTTGGCCTCCAGATCGTCACGCAGCAGTTCCGAAGCACGTTTG > NC_002947/4957599‑4957887 | tCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCtt > 1:697169/1‑150 (MQ=255) cTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCc > 2:18481‑M2/1‑149 (MQ=255) gTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCcgcc > 1:358968‑M2/1‑146 (MQ=255) aGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCcgccga > 2:825329‑M2/1‑144 (MQ=255) gAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGc > 1:903770/1‑150 (MQ=255) gAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGc > 1:529835/1‑150 (MQ=255) gggTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGa > 1:896226/1‑150 (MQ=255) aTGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACGTTAGAGCATTGCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCg > 2:1040668/1‑150 (MQ=255) ggCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATgc > 1:632603/1‑150 (MQ=255) gACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCggg < 1:371304/150‑1 (MQ=255) gACAACCTCGATTGCCAGGACCGACGCCTTCGAGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGAACACGTGCCGCCGAGCACGATCTAGCCGGCCTGGGCCATgcgttggg > 2:459755/1‑145 (MQ=255) aCCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGGCAAGGGcgccgaggaaatgatctaa < 1:15494‑M2/126‑20 (MQ=255) aCCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGGCAAGGGcgccgaggaaatgatctaa > 2:15494‑M2/1‑107 (MQ=255) cTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATgg > 2:756672/1‑150 (MQ=255) cTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATgg > 1:965206/1‑150 (MQ=255) tCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGt < 2:632603/150‑1 (MQ=255) tCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGt > 1:1084809/1‑150 (MQ=255) gATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGa < 1:685072/150‑1 (MQ=255) ccAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGAtt > 2:182178/1‑150 (MQ=255) cAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGAttt > 2:358086/1‑150 (MQ=255) ccGACGCATTCGCGGGTGAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGAtttctttc < 1:1145255/150‑1 (MQ=255) cGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGa < 1:605348/141‑1 (MQ=255) cGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGa > 2:605348/1‑141 (MQ=255) ttCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGt > 2:678806/1‑150 (MQ=255) ttCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATAGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGt > 2:275012/1‑150 (MQ=255) tCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGtt < 2:530664/150‑1 (MQ=255) cgGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTcc < 2:1084809/150‑1 (MQ=255) ggTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGACTAGCTTAGATCATTTCCTCGGCTCCCTTGCCGCCGAGCAGGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCAc > 1:812857/1‑150 (MQ=255) ggTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCAc < 1:127178/150‑1 (MQ=255) aCCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCa > 2:465025/1‑144 (MQ=255) aCCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCa < 1:465025/144‑1 (MQ=255) cccGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCACGTCGCt < 1:600343/150‑1 (MQ=255) cccGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCACGTCGCt > 2:868087/1‑150 (MQ=255) ccGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGGCAAGGGcgccgaggaaatgatctaag < 1:840386‑M2/90‑21 (MQ=255) ccGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGGCAAGGGcgccgaggaaatgatctaag > 2:840386‑M2/1‑70 (MQ=255) gCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCACGTCGCTGAc < 2:903770/150‑1 (MQ=255) tACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCAGGCGCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCAGGCCGCTGACACGTa > 1:386010/1‑150 (MQ=255) tACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGAtttct < 2:473283/119‑1 (MQ=255) tACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGAtttct > 1:473283/1‑119 (MQ=255) aaaaGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATg > 1:155887/1‑104 (MQ=255) aaaaGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATg < 2:155887/104‑1 (MQ=255) aaGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAAt < 2:23589/101‑1 (MQ=255) aaGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAAt > 1:23589/1‑101 (MQ=255) gcgTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCACGTCGCTGACCCGTACCGGCCCTTTg < 1:1057037/150‑1 (MQ=255) gcgTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAAACGTTAGGATTTCTTTCTGCGCGGTTTCCACGTCGCTGACCCGTACCGGCCCTTTg < 1:30117/150‑1 (MQ=255) cTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCACGTCGCTGACCCGTACCGGCCCTTTGGCCTCCa > 2:166199/1‑150 (MQ=255) aTGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGTCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCACGTCGCTGACCCGTACCGGCCCTTTGGCCTCCAGa > 2:662014/1‑150 (MQ=255) gggATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCACGTCGCTGACCCGTACCGGCCCTTTGGCCTCCAGATc < 2:318243/150‑1 (MQ=255) gggATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCACGTCGCTGACCCGTACCGGCCCTTTGGCCTCCAGATc < 1:358086/150‑1 (MQ=255) gAATACCTTAGATCATTTCCTCGGCGCACTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCACGTCGCTGACCCGTACCGGCCCTTTGGCCTCCAGATCGTc < 2:1144045/145‑1 (MQ=255) gAATACCTTAGATCATTTCCTCGGCGCACTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCACGTCGCTGACCCGTACCGGCCCTTTGGCCTCCAGATCGTc > 1:1144045/1‑145 (MQ=255) tACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCACGTCGCTGACCCGTACCGGCCCTTTGGCCTCCAGATCGTCACgcagca < 2:980907/150‑1 (MQ=255) ccTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAAt < 1:534274/71‑1 (MQ=255) ccTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAAt > 2:534274/1‑71 (MQ=255) cTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCACGTCGCTGACCCGTACCGGCCCTTTGGCCTCCAGATCGTCAc < 2:1027905/141‑1 (MQ=255) cTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCACGTCGCTGACCCGTACCGGCCCTTTGGCCTCCAGATCGTCAc > 1:1027905/1‑141 (MQ=255) cTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCACGTCGCTGACCCGTACCGGCCCTTTGGCCTCCAGATCGTCACGCAGCAGtt > 1:638095/1‑150 (MQ=255) cTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCACGTCGCTGACCCGTACCGGCCCTTTGGCCTCCAGATCGTCACGCAGCAGtt > 1:332131/1‑150 (MQ=255) cTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCACGTCGCTGACCCGTACCGGCCCTTTGGCCTCCAGATCGTCACGCAGCAGtt > 2:403617/1‑150 (MQ=255) aTCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTgcgc > 1:436524/1‑86 (MQ=255) aTCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTgcgc < 2:436524/86‑1 (MQ=255) aTTTCCTCGGCGCCCTTGTCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCACGTCGCTGACCCGTACCGGCCCTTTGGCCTCCAGATCGTCACGCAGCAGTTCCGAAGCa < 1:662014/150‑1 (MQ=255) tttCCTCGGCGCCCTTGCcgccgagcaaatgatctaaggtattcgcgatcccatagccgacgccgccttttgtaggagcgggttt < 1:900640‑M2/85‑68 (MQ=255) tttCCTCGGCGCCCTTGCcgccgagcaaatgatctaaggtattcgcgatcccatagccgacgccgccttttgtaggagcgggttt > 2:900640‑M2/1‑18 (MQ=255) ccTCGGCGCCCTTGCcgccgaggaaatgatctaaggtattcgcgatcccatagccgacgccgccttttgtaggagcgggtttacccgcgaaggcgtcggtcctggcaatcgaggttgtcgctgccgacgcattcgcgggtgaacccgctc < 2:675983‑M2/150‑136 (MQ=255) tCGGCGCCCTTGCcgccgaggaaatgatctaaggtattcgcgatcccatagccgacgccgccttttgta < 1:1064837‑M2/69‑57 (MQ=255) tCGGCGCCCTTGCcgccgaggaaatgatctaaggtattcgcgatcccatagccgacgccgccttttgta > 2:1064837‑M2/1‑13 (MQ=255) tCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCACGTCGCTGACCCGTACCGGCCCTTTGGCCTCCAGATCGTCACGCAGCAGTTCCGAAGCACGTTTg > 1:1082753/1‑150 (MQ=255) tCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCACGTCGCTGACCCGTACCGGCCCTTTGGCCTCCAGATCGTCACGCAGCAGTTCCGAAGCACGTTTg > 1:1088051/1‑150 (MQ=255) | TCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCACGTCGCTGACCCGTACCGGCCCTTTGGCCTCCAGATCGTCACGCAGCAGTTCCGAAGCACGTTTG > NC_002947/4957599‑4957887 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |