Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 4,967,684 A→G 6.3% V13A (GTC→GCC)  fliD ← flagellar filament capping protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,967,6840AG 6.3% 183.0 / 2.5 63V13A (GTC→GCC) fliDflagellar filament capping protein
Reads supporting (aligned to +/- strand):  ref base A (26/33);  new base G (2/2);  total (28/35)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.98e-01

CAATCGCAGAGCGGAAGGTATCCAATGCATTCTTAATCATGCCCACAGCAGACACTTGTGTGGTCGTAGTCTTCTGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGCCAATTGCTTGACGATGAATGAGCGAGACACAATCCGAGTCAAGACTCATGCCAACATTACACATTGTCATCAAGTAAAAAACC  >  NC_002947/4967535‑4967831
                                                                                                                                                     |                                                                                                                                                   
cAATCGCAGAGCGGAAGGTATCCAATGCATTCTTAATCATGCCCACAGCAGACACTTGTGTGGTCGTAGTCTTCTGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGa                                                                                                                                                     >  2:1158838/1‑150 (MQ=255)
            ggAAGGTATCCAATGCATTCTTAATCATGCCCACAGCAGACACTTGTGTGGTCGTAGTCTTCTGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGa                                                                                                                                         >  2:673298/1‑150 (MQ=255)
            ggAACGTATCCTATGTATGCTTAATCATGCCCAGCGCTGACACTTGTGTCGGCTTAGCCTTCTGTTGGCTAGTGATGCGCTGTTTCTTGGGCGCCTTTTCGGCATCGGCCAGGGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGa                                                                                                                                         <  2:514110/150‑1 (MQ=255)
              aaGGTATCCAATGCATTCTTAATCATGCCCACAGCAGACACTTGTGTGGTCGTAGTCTTCTGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATa                                                                                                                                       <  1:1158838/150‑1 (MQ=255)
                 gTATCCAATGCATTCTTAATCATGCCCACAGCAGACACTTGTGTGGTCGTAGTCTTCTGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCa                                                                                                                                    >  2:462523/1‑150 (MQ=255)
                      cAATGCATTCTTAATCATGCCCACAGCAGACACTTGTGTGGTCGTAGTCTTCTGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCactgac                                                                                                                               >  1:414572/1‑150 (MQ=255)
                      cAATGCATTCTTAATCATGCCCACAGCAGACACTTGTGTGGTCGTAGTCTTCTGTTGAGTAGTGATCTACTGTTCCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATAGACTGGGTATCTACGCCGGAGCCCATACCactgac                                                                                                                               >  2:127795/1‑150 (MQ=255)
                          gCATTCTTAATCATGCCCACAGCAGACACTTGTGTGGTCGTAGTCTTCTGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACtgtt                                                                                                                           <  1:219137/150‑1 (MQ=255)
                           cATTCTTAATCATGCCCACAGCAGACACTTGTGTGGTCGTAGTCTTCTGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACtgttg                                                                                                                          <  2:1009859/150‑1 (MQ=255)
                             ttCTTAATCATGCCCACAGCAGACACTTGTGTGGTCGTAGTCTTCTGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTa                                                                                                                        >  2:127265/1‑150 (MQ=255)
                             ttCTTAATCATGCCCACAGCAGACACTTGTGTGGTCGTAGTCTTCTGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTa                                                                                                                        <  1:456093/150‑1 (MQ=255)
                                ttAATCATGCCCACAGCAGACACTTGTGTGGTCGTAGTCTTCTGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACtt                                                                                                                     >  2:1032571/1‑150 (MQ=255)
                                ttAATCATGCCCACAGCAGACACTTGTGTGGTCGTAGTCTTCTGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACtt                                                                                                                     >  2:226779/1‑150 (MQ=255)
                                ttAATCATGCCCACAGCAGACACTTGTGTGGTCGTAGTCTTCTGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACtt                                                                                                                     <  2:1194533/150‑1 (MQ=255)
                                ttAATCATGCCCACAGCAGACACTTGTGTGGTCGTAGTCTTCTGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACtt                                                                                                                     <  1:673298/150‑1 (MQ=255)
                                             cagcagACACTTGTGTGGTCGTAGTCTTCTGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTtat                                                                                                        >  1:697128/1‑150 (MQ=255)
                                                cagACACTTGTGTGGTCGTAGTCTTCTGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATc                                                                                                     >  1:798878/1‑150 (MQ=255)
                                                  gACACTTGTGTGGTCGTAGTCTTCTGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACGGACTGTTGTACTTGCCATTGCTTTATATccc                                                                                                   <  1:741203/150‑1 (MQ=255)
                                                   acacTTGTGTGGTCGTAGTCTTCTGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCt                                                                                                  <  1:227729/150‑1 (MQ=255)
                                                     acTTGTGTGGTCGTAGTCTTCTGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGa                                                                                                >  1:778625/1‑150 (MQ=255)
                                                     acTTGTGTGGTCGTAGTCTCCTGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGa                                                                                                >  2:221587/1‑150 (MQ=255)
                                                        tgtgtgGTCGTAGTCTTCTGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCa                                                                                             <  1:221587/150‑1 (MQ=255)
                                                          tgtgGTCGTAGTCTTCTGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGc                                                                                           <  1:127265/150‑1 (MQ=255)
                                                           gtgGTCGTAGTCTTCTGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCg                                                                                          <  1:1032571/150‑1 (MQ=255)
                                                              gTCGTAGTCTTCTGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAAt                                                                                       <  1:1449/150‑1 (MQ=255)
                                                              gTCGTAGTCTTCTGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAAt                                                                                       >  2:464885/1‑150 (MQ=255)
                                                                cGTAGTCTTCTGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGc                                                                                     <  2:798878/150‑1 (MQ=255)
                                                                   aGTCTTCTGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGGCTCCGGCGTCGATAccca                                                                                                                                   <  1:636735/101‑3 (MQ=38)
                                                                   aGTCTTCTGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGGCTCCGGCGTCGATAccca                                                                                                                                   >  2:636735/1‑99 (MQ=38)
                                                                     tcttctGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGa                                                                                                                                              <  2:962228/88‑1 (MQ=255)
                                                                     tcttctGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGa                                                                                                                                              >  1:962228/1‑88 (MQ=255)
                                                                       ttctGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGCCAATTGc                                                                              >  1:321155/1‑150 (MQ=255)
                                                                        tctGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGCCAATTGCt                                                                             <  1:462523/150‑1 (MQ=255)
                                                                         ctGTTGAGTAGGGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCGAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGCCAATTGCtt                                                                            <  1:127795/150‑1 (MQ=255)
                                                                                gtagtGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGCCAATTGCTTGa                                                                          >  1:108275/1‑145 (MQ=255)
                                                                                gtagtGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGCCAATTGCTTGa                                                                          <  2:108275/145‑1 (MQ=255)
                                                                                   gtGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGCCAATTGCTTGACGatgaat                                                                  <  2:778625/150‑1 (MQ=255)
                                                                                          gctgTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGCCAATTGCTTGACGATGAATGAGCgag                                                           <  1:464885/150‑1 (MQ=255)
                                                                                           ctgTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGCCAATTGCTTGACGATGAATGAGCgaga                                                          <  2:25104/150‑1 (MQ=255)
                                                                                            tgTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGCCAATTGCTTGACGATGAATGAGCGAGac                                                         >  2:1202304/1‑150 (MQ=255)
                                                                                                       cgcCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTTCTTGTCGTTGCGTGATATCCCTGATCAGCGAATGCCAATTGCTTGACGATGAATGAGCGAGACACAATCCGAGt                                              >  2:1002238/1‑150 (MQ=255)
                                                                                                           ttttCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGCCAATTGCTTGACGATGAATGAGCGAGACACAATCCGAGTCAAg                                          >  1:364650/1‑150 (MQ=255)
                                                                                                                ggCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGCCAATTGCTTGACGATGAATGAGCGAGACACAATCCGAGTCaa                                           <  1:702537/144‑1 (MQ=255)
                                                                                                                ggCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGCCAATTGCTTGACGATGAATGAGCGAGACACAATCCGAGTCaa                                           >  2:702537/1‑144 (MQ=255)
                                                                                                                  cATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGc                                                                                                             >  1:326825/1‑76 (MQ=255)
                                                                                                                  cATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGc                                                                                                             <  2:326825/76‑1 (MQ=255)
                                                                                                                  cATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGCCAATTGCTTGACGATGAATGAGCGAGACACAATCCGAGTCAAGACTCATg                                   <  1:1202304/150‑1 (MQ=255)
                                                                                                                  cATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGCCAATTGCTTGACGATGAATGAGCGAGACACAATCCGAGTCAAGACTCATg                                   <  2:364650/150‑1 (MQ=255)
                                                                                                                    tCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTTCTTTATATCCCTGATCAGCGAATGCCAATTGCTTGAAGATGAATGAGCGAGACACAATCCGAGTCAAGACTCATGcc                                 >  2:663066/1‑150 (MQ=255)
                                                                                                                       gCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGCCaa                                                                                  >  2:818649/1‑98 (MQ=255)
                                                                                                                       gCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGCCaa                                                                                  <  1:818649/98‑1 (MQ=255)
                                                                                                                          agagCCTTGACAATCGACTGGGTATCGACGCCGGAGACCCAACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGCCAATTGCTTGACGATGAATGAGCGAGACACAATCCGAGTCAAGACTCATGCCAACAtt                           <  1:918558/150‑1 (MQ=255)
                                                                                                                           gagCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGc                                                                                     >  1:870742/1‑91 (MQ=255)
                                                                                                                           gagCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGc                                                                                     <  2:870742/91‑1 (MQ=255)
                                                                                                                              ccTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGCCAATTGCTTGACGATGAATGAGCGAGACACaa                                                     <  2:1023559/120‑1 (MQ=255)
                                                                                                                              ccTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGCCAATTGCTTGACGATGAATGAGCGAGACACaa                                                     >  1:1023559/1‑120 (MQ=255)
                                                                                                                                ttGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGCCAATTGCTTGACGATGAATGAGCGAGACACAATCCGAGTCAAGACTCATGCCAACAt                            >  1:126876/1‑143 (MQ=255)
                                                                                                                                ttGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGCCAATTGCTTGACGATGAATGAGCGAGACACAATCCGAGTCAAGACTCATGCCAACAt                            <  2:126876/143‑1 (MQ=255)
                                                                                                                                    cAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGCCAATTGCTTGACGATGAATGAGCGAGACACAATCCGAGTCAAGACTCATGCCAACATTACACATTGtc                 <  1:226779/150‑1 (MQ=255)
                                                                                                                                         tcagtggTATCGGCTCCGGCGTCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGCCAATTGCTTGACGATGAATGAGCGAGACACAATCCGAGTCAAGACTCATGCCaa                               >  1:1134020/6‑131 (MQ=255)
                                                                                                                                         tcagtggTATCGGCTCCGGCGTCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGCCAATTGCTTGACGATGAATGAGCGAGACACAATCCGAGTCAAGACTCATGCCaa                               <  2:1134020/126‑1 (MQ=255)
                                                                                                                                              ggTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGCCAATTGCTTGACGATGAATGAGc                                                              >  2:305051/1‑95 (MQ=255)
                                                                                                                                              ggTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGCCAATTGCTTGACGATGAATGAGc                                                              <  1:305051/95‑1 (MQ=255)
                                                                                                                                                   cGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGCCAATTGCTTGACGATGAATGAGCGAGACACAATCCGAGTCAAGACTCATGCCAACATTACACATTGTCATCAAGTAAAAAAcc  <  2:321155/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
CAATCGCAGAGCGGAAGGTATCCAATGCATTCTTAATCATGCCCACAGCAGACACTTGTGTGGTCGTAGTCTTCTGTTGAGTAGTGATCTGCTGTTGCTTGGGCGCCTTTTCGGCATCGGCCAGAGCCTTGACAATCGACTGGGTATCGACGCCGGAGCCGATACCACTGACTGTTGTACTTGCCATTGCTTTATATCCCTGATCAGCGAATGCCAATTGCTTGACGATGAATGAGCGAGACACAATCCGAGTCAAGACTCATGCCAACATTACACATTGTCATCAAGTAAAAAACC  >  NC_002947/4967535‑4967831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑