| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,444,978 | A→G | 5.3% | intergenic (‑151/‑115) | PP_4781 ← / → thiD | sensor histidine kinase/phosphomethylpyrimidine kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,444,978 | 0 | A | G | 5.3% | 224.7 / 2.2 | 75 | intergenic (‑151/‑115) | PP_4781/thiD | sensor histidine kinase/phosphomethylpyrimidine kinase |
| Reads supporting (aligned to +/- strand): ref base A (37/34); new base G (2/2); total (39/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.48e-01 | |||||||||||
GCCTGTCCGGTCGCGTCGCGGTAGCCTCCCATCCGTTTGAGACGACGTGATCCTGCAGAACCCGTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAGGTTTGGTGGTAAGCTCGCCGACCATGAATACCTACAGCTCCCGCCCCGTT > NC_002947/5444842‑5445119 | gCCTGTCCGGTCGCGTCGCGGTAGCCTCCCATCCGTTTGAGACGACGTGATCCTGCAGAACCCGTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCaa > 1:441185/1‑150 (MQ=255)gCCTGTCCGGTCGCGTCGCGGTAGCCTCCCATCCGTTTGAGACGACGTGATCCTGCAGAACCCGTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCaa < 1:354709/150‑1 (MQ=255) tCCGGTCGCGTCGCGGTAGCCTCCCATCCGTTTGAGACGACGTGATCCTGCAGAACCCGTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGaaaa < 1:511893/132‑1 (MQ=255) tCCGGTCGCGTCGCGGTAGCCTCCCATCCGTTTGAGACGACGTGATCCTGCAGAACCCGTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGaaaa > 2:511893/1‑132 (MQ=255) cgtcgcgGTAGCCTCCCATCCGTTTGAGACGACGTGATCCTGCAGAACCCGTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAGGGCTCTAAATCAAt < 1:690166/138‑1 (MQ=255) cgtcgcgGTAGCCTCCCATCCGTTTGAGACGACGTGATCCTGCAGAACCCGTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAGGGCTCTAAATCAAt > 2:690166/1‑138 (MQ=255) gcgGTAGCCTCCCATCCGTTTGAGACGACGTGATCCTGCAGAACCCTTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAAc < 1:258697/150‑1 (MQ=255) ccTCCCATCCGTTTGAGACGACGTGATCCTGCAGAACCCGTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCttt < 1:466797/132‑1 (MQ=255) ccTCCCATCCGTTTGAGACGACGTGATCCTGCAGAACCCGTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCttt > 2:466797/1‑132 (MQ=255) ccATCCGTTTGAGACGACGTGATCCTGCAGAACCCGTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAAc > 2:1079195/1‑150 (MQ=255) cATCCGTTTGAGACGACGTGATCCTGCANAACCCGTTNCTCGAGTTANCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAAcc > 1:329701/1‑150 (MQ=255) cATCCGTTTGAGACGACGTGATCCTGCAGAACCCGTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAAcc > 2:546812/1‑150 (MQ=255) aTCCGTTTGAGACGACGTGATCCTGCAGAACCCGTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATa > 2:361581/1‑131 (MQ=255) aTCCGTTTGAGACGACGTGATCCTGCAGAACCCGTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATa < 1:361581/131‑1 (MQ=255) cGTTTGAGACGACGTGATCCTGCAGAACCCGTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGAc > 1:333452/1‑150 (MQ=255) cGTTTGAGACGACGTGATCCTGCAGAACCCGTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGAc < 1:125033/150‑1 (MQ=255) gTTTGAGACGACGTGATCCTGCAGAACCCGTTTATCGAGTTATGCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGAcc > 2:873966/1‑150 (MQ=255) tttGAGACGACGTGATCCTGCAGAACCCGTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACcg > 2:795477/1‑150 (MQ=255) tGAGACGACGTGATCCTGCAGAACCCGTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACcg‑at < 1:795477/150‑1 (MQ=255) gTGATCCTGCAGAACCCGTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCaa < 1:935369/113‑1 (MQ=255) gTGATCCTGCAGAACCCGTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCaa > 2:935369/1‑113 (MQ=255) aTCCTGCAGAACCCGTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTaaaa < 1:127689/150‑1 (MQ=255) tCCTGCAGAACCCGTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTaaaa > 2:1040330/1‑149 (MQ=255) tCCTGCAGAACCCGTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTaaaa < 1:1040330/149‑1 (MQ=255) cTGCAGAACCCGTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTc > 1:1004336/1‑150 (MQ=255) aaccGTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCACTCAATAACCCGACCG‑ATCGATCAGGAAAGCTCGTTTGTc < 2:707723/148‑1 (MQ=255) ccGTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCaa > 1:99097/1‑89 (MQ=255) ccGTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCaa < 2:99097/89‑1 (MQ=255) ccGTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCgg > 1:324791/1‑150 (MQ=255) gTTTATGGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGAc > 2:203563/1‑150 (MQ=255) gTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCttt > 2:1193968/1‑93 (MQ=255) gTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCttt < 1:1193968/93‑1 (MQ=255) tATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGAt > 1:114094/1‑150 (MQ=255) tCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATcc > 2:212073/1‑150 (MQ=255) aGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGcc < 2:1004336/150‑1 (MQ=255) cGAGCACTCTAGCATAGCCTCACAGCCGGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTAACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAg < 2:90228/150‑1 (MQ=255) gAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATTCTTTCAATAGaaaa < 2:1199925/87‑1 (MQ=255) gAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGaaaa > 1:1199925/1‑87 (MQ=255) gAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGAc > 1:335202/1‑104 (MQ=255) gAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGAc < 2:335202/104‑1 (MQ=255) gAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAgg < 2:333452/150‑1 (MQ=255) gAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAgg > 2:1013289/1‑150 (MQ=255) gCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAGGtt < 1:1079195/150‑1 (MQ=255) tctAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAACCTCGTTTGTCGGACGATCCGCCCAAACAGGTTtggt > 2:400409/1‑150 (MQ=255) tctAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAGGTTtggt < 2:441185/150‑1 (MQ=255) gCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAGGTTTGGTGGTa > 1:607411/1‑150 (MQ=255) tAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAg < 2:538048/136‑1 (MQ=255) tAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAg > 1:538048/1‑136 (MQ=255) aGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATc < 1:1013475/124‑1 (MQ=255) aGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATc > 2:1013475/1‑124 (MQ=255) tcaaagccTGCCAATCGGCAACATAAAAACACAAAGAAAAGGCTCTAAATCAATTCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAACCTCGTTTGTCGGACGATCCGCCCAAACAGGTTTGGTGGTAAGCTCGcc < 2:329701/144‑1 (MQ=255) tCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAGGGCTCTAAATCAATGCTTTCAATAGaa > 1:844567/1‑67 (MQ=255) tCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAGGGCTCTAAATCAATGCTTTCAATAGaa < 2:844567/67‑1 (MQ=255) tCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGccc > 2:1143343/1‑125 (MQ=255) tCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGccc < 1:1143343/125‑1 (MQ=255) tCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAGGTTtggt < 2:1148846/138‑1 (MQ=255) tCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAGGTTtggt > 1:1148846/1‑138 (MQ=255) tCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAGGTTTGGTGGTAAGCTCGcc > 2:643271/1‑150 (MQ=255) cacaACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGt < 2:438122/106‑1 (MQ=255) cacaACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGt > 1:438122/1‑106 (MQ=255) acaACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGTTCGAAATCAATGCGTTCAATAGAACACCAATCACTCAAGTGACTGCATCGGT‑AGTATGACTGGTTTGTCGGACGATCCGCCCAAACAGGTTTGGTGGTATGCTCGCCGa > 1:1177878/1‑150 (MQ=255) aaCCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAGGTTTGGTGGTAAGCTCGCCGAcc < 1:873966/150‑1 (MQ=255) cTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAg > 1:957935/1‑124 (MQ=255) cTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAg < 2:957935/124‑1 (MQ=255) cTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTAAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAGGTTTGGTGGTAAGCTCGCCGACCATg > 2:234184/1‑150 (MQ=255) aaTCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAGGTTTGGTGGTAAGCTCGCCGACCATGAATAc < 1:1170737/150‑1 (MQ=255) tCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAGGTTTGGTGGTAAGCTCGCCGACCATGAATACCt > 2:204479/1‑150 (MQ=255) cGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAGGTTTGGTGGTAAGCTCGCCGACCATGAATACCTa < 1:204479/150‑1 (MQ=255) ggCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCATTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAGGTTTGGTGGTAAGCTCGCCGACCATGAATACCTAc > 1:1147928/1‑150 (MQ=255) gCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAGGTTTGGTGGTAAGCTCGCCGACCATGAATACCTACa > 2:677200/1‑150 (MQ=255) gCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAGGTTTGGTGGTAAGCTCGCCGACCATGAATACCTACa < 2:324791/150‑1 (MQ=255) caTAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAGGTTTGGTGGTAAGCTCGCCGACCATGAATACCTACAGCTc < 1:212073/150‑1 (MQ=255) aTAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAGGTTTGGTGGTAAGCTCGCCGACCATGAATACCTACAGCTcc > 1:44097/1‑150 (MQ=255) acacAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAGGTTTGGTGGTAAGCTCGCCGACCATGAATACCTACAGCTCCCGcccc < 1:546812/150‑1 (MQ=255) caAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAGGTTTGGTGGTAAGCTCGCCGACCATGAATACCTACAGCTCCCGCCCCGtt < 2:607411/150‑1 (MQ=255) aaaGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAGGTTTGGTGGTAAGCTCGCCGACCAt < 2:515579/124‑1 (MQ=255) aaaGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAGGTTTGGTGGTAAGCTCGCCGACCAt > 1:515579/1‑124 (MQ=255) aaaaGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAGGTTTGGTGGTAAGCTCGCCGACCATGAATACCTACAGCTCCCGCCCCGtt < 2:584230/145‑1 (MQ=255) aaaaGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAGGTTTGGTGGTAAGCTCGCCGACCATGAATACCTACAGCTCCCGCCCCGtt > 1:584230/1‑145 (MQ=255) | GCCTGTCCGGTCGCGTCGCGGTAGCCTCCCATCCGTTTGAGACGACGTGATCCTGCAGAACCCGTTTATCGAGTTATCCGAGCACTCTAGCATAGCCTCACAACCTGGCAATCGGCCACATAAAAACACAAAGAAAAGGCTCTAAATCAATGCTTTCAATAGAAAACCAATCAATAACCTGACCG‑ATCGATCAGTAAAACTCGTTTGTCGGACGATCCGCCCAAACAGGTTTGGTGGTAAGCTCGCCGACCATGAATACCTACAGCTCCCGCCCCGTT > NC_002947/5444842‑5445119 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |