Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947195,6340CT40.2% 66.9 / 86.4 94T380T (ACC→ACT) PP_0168putative surface adhesion protein
Reads supporting (aligned to +/- strand):  ref base C (32/23);  new base T (18/19);  total (51/43)
Fisher's exact test for biased strand distribution p-value = 4.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 105 total aligned reads displayed.

TTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAACCCAGGGCA  >  NC_002947/195490‑195782
                                                                                                                                                |                                                                                                                                                    
tttCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACcgc                                                                                                                                                 >  1:423864/1‑150 (MQ=255)
  tCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGGCTCGGTCGACACCACCACCGCGa                                                                                                                                               <  2:1090595/150‑1 (MQ=255)
   ccAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGAc                                                                                                                                              <  2:373093/150‑1 (MQ=40)
   ccAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGATAATTTCGACCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGAc                                                                                                                                              <  2:484231/150‑1 (MQ=255)
     aGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGAccc                                                                                                                                            >  1:243553/1‑150 (MQ=255)
     aGACCCCGGCCAATGACGTATAAAACAACGGTTCGACCGTCAGCGTCACCATAGCGAACGCCACCGGCGGTAATTTCAAGCAACTGACCCCGAATCCCACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGAccc                                                                                                                                            <  2:1119820/150‑1 (MQ=14)
            ggCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGc                                                                                                                                     <  2:243553/150‑1 (MQ=255)
              cgaaTGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGa                                                                                                                                   <  2:364031/148‑1 (MQ=2)
               cAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAg                                                                                                                                  >  2:709600/1‑150 (MQ=39)
                aaTGACGCCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGACTCCCACCCCGGCTCCGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGc                                                                                                                                 <  1:648373/150‑1 (MQ=255)
                    aCGTCGACAACAACGGTTCGACCGTCAGTGTCATCATCGAGAGCGCCGCCGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGt                                                                                                                             <  2:229917/150‑1 (MQ=11)
                      gTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCg                                                                                                                           <  1:1037909/150‑1 (MQ=18)
                      gTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCg                                                                                                                           <  2:1032835/150‑1 (MQ=12)
                        cTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGCCCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGt                                                                                                                         <  1:88731/150‑1 (MQ=12)
                         tACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTc                                                                                                                        >  2:22234/1‑150 (MQ=18)
                          acaacaACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCa                                                                                                                       >  1:1031968/1‑150 (MQ=12)
                           caacaaCGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCAc                                                                                                                      >  1:1319412/1‑150 (MQ=12)
                            aacaacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCAcc                                                                                                                     >  1:1004501/1‑150 (MQ=17)
                              caacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCACGGCTCAGACCACGATCAACGACTCAGCCGCCAGCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGa                                                                                                                   >  1:1095446/1‑150 (MQ=11)
                                    ttCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCAACCCTGACGGCGAGCCCGTCGGTCACCAAAggcgg                                                                                                             >  1:74393/1‑150 (MQ=255)
                                     tCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAggcggc                                                                                                            <  2:846616/150‑1 (MQ=38)
                                      cGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGgcggcg                                                                                                           <  2:1326162/150‑1 (MQ=17)
                                         ccGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAACAACTGACCCCGAATTCGACCCCGGCTCAGACCACGATCAACAACTCGGTCAACAACACAACCGAGACCATGACGGCGAGCCCGTTCGTCAACGAAGGCGGCgaga                                                                                                        >  1:421147/1‑150 (MQ=11)
                                         ccGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGa                                                                                                        <  1:528126/150‑1 (MQ=19)
                                           gccAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACTATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATc                                                                                                      <  2:1008603/148‑1 (MQ=255)
                                            tCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCa                                                                                                     <  1:161172/150‑1 (MQ=40)
                                                cGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTa                                                                                                 <  1:312584/150‑1 (MQ=40)
                                                  tCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTaca                                                                                               >  1:329335/1‑150 (MQ=255)
                                                  tCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGa                                                                                                                                   <  2:685906/114‑1 (MQ=12)
                                                  tCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGa                                                                                                                                   >  1:685906/1‑114 (MQ=255)
                                                    aCCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCGGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACAcc                                                                                             <  1:652152/150‑1 (MQ=255)
                                                      cATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGt                                                                                           <  1:875553/150‑1 (MQ=17)
                                                       aTCGAGAGCGCGACCGGCGGGAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTg                                                                                          >  2:569498/1‑150 (MQ=255)
                                                        tCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGa                                                                                         <  1:1003096/150‑1 (MQ=12)
                                                        tCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGa                                                                                         <  1:985681/150‑1 (MQ=18)
                                                        tCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGa                                                                                         >  2:897073/1‑150 (MQ=18)
                                                         cGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGAc                                                                                        <  2:1240051/150‑1 (MQ=12)
                                                          gagaACGCCACCGGCGGTAATTACGAGCAACTGCCCCCGAATCCGCCCCCGGCTCAGACCAGGACAAACGACTCGGTCGCCACCACCACCGCGACCCTGACGGCGAACACGTCGGTCACCGAAGGCGGCGTGATCATTTACACCATAAcc                                                                                       >  2:67386/1‑150 (MQ=14)
                                                           agaACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGAccc                                                                                      >  1:847234/1‑150 (MQ=255)
                                                             aaCGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGAcc                                                                                                                                             >  2:513569/1‑93 (MQ=255)
                                                              ccGCAACCGGAGGTAATTTCGAGCAACTGACCCCTAATCCGACCCCGTCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGTCGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGa                                                                                   <  2:531200/149‑1 (MQ=14)
                                                              aCGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGa                                                                                   <  2:208886/150‑1 (MQ=40)
                                                              aCGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGa                                                                                   <  1:89706/150‑1 (MQ=40)
                                                                  cACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCaa                                                                               >  1:111213/1‑150 (MQ=40)
                                                                  cACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCaa                                                                               >  2:283444/1‑150 (MQ=40)
                                                                    ccGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAAcc                                                                             >  1:933649/1‑150 (MQ=255)
                                                                      cgcggTAATTTCGAGCAACTGACCCCGAAGCCGACCCCGCCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCt                                                                           <  1:625447/149‑1 (MQ=255)
                                                                            aaTTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAg                                                                     >  1:132239/1‑150 (MQ=255)
                                                                             aTTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGa                                                                    <  1:897073/150‑1 (MQ=25)
                                                                             aTTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGa                                                                    <  2:132239/150‑1 (MQ=255)
                                                                             aTTTCGAGAAACTGACCCCGAATCTGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCATTTCCGATGCCCTGACGGCGAGCCCGTCGTTCACCGAATCCGGCGTGATCACTTTCACCGTGACCCTGAGCAACCCTGCCCAGa                                                                    <  2:212330/150‑1 (MQ=11)
                                                                              tttCGATCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCAACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCAAAGGCGGCGTGTTCACTTGCACCGTGACCCTGAGCACCCCCGCCCAGAc                                                                   >  2:70617/1‑150 (MQ=11)
                                                                                tCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGc                                                                 >  2:684081/1‑150 (MQ=14)
                                                                                tCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGc                                                                 <  1:470932/150‑1 (MQ=40)
                                                                                   aGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCgg                                                              >  1:377864/1‑150 (MQ=12)
                                                                                     cAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCTCGAAATGCGGCGTGATCACTTACACCGTTACCCTGAGCAACCCTGCCCAGACGCCGGtg                                                            >  1:694608/1‑149 (MQ=11)
                                                                                     cAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTa                                                            >  1:798659/1‑150 (MQ=38)
                                                                                      aaCTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCATGCCCAGACGCCGGTaa                                                           >  1:522036/1‑150 (MQ=255)
                                                                                        cTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAAcc                                                         <  2:1031968/150‑1 (MQ=255)
                                                                                        cTGACCCCGAATCCGACCCCGGCTAAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGAcc                                                         <  1:630377/150‑1 (MQ=0)
                                                                                         tGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGCTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCg                                                        >  2:343799/1‑150 (MQ=255)
                                                                                           aCCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTg                                                      >  1:672783/1‑150 (MQ=255)
                                                                                             cccGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGaa                                                    >  1:2119/1‑150 (MQ=255)
                                                                                             cccGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGccc                                                                       <  2:77183/131‑1 (MQ=255)
                                                                                             cccGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGccc                                                                       >  1:77183/1‑131 (MQ=255)
                                                                                              ccGAATCCGACCCCGGCTCAGACCACGATCAAGCACTCGGTCGACACCACTACCACGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAAc                                                   >  2:816768/1‑150 (MQ=255)
                                                                                              ccGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGGCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGacc                                                   >  2:1026524/1‑148 (MQ=11)
                                                                                              ccGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGGCCCTGACGGCGCGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAAc                                                   <  2:1319412/150‑1 (MQ=255)
                                                                                              ccGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGt                                                       >  1:258054/1‑146 (MQ=17)
                                                                                              ccGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAAc                                                   >  2:184844/1‑150 (MQ=255)
                                                                                                   tCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACaccactacc                                                                                                                                                   >  2:215469/1‑49 (MQ=255)
                                                                                                   tCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACaccactacc                                                                                                                                                   <  1:215469/49‑1 (MQ=255)
                                                                                                   tCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTc                                              <  1:16090/150‑1 (MQ=255)
                                                                                                      gACCCCGGCTCAGACCACGATCAACGACTCGGTCGAcaccacca                                                                                                                                                     <  2:201193/44‑1 (MQ=38)
                                                                                                      gACCCCGGCTCAGACCACGATCAACGACTCGGTCGAcaccacca                                                                                                                                                     >  1:201193/1‑44 (MQ=38)
                                                                                                                cAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACg                                 >  1:650951/1‑150 (MQ=255)
                                                                                                                    ccACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTa                             >  1:50022/1‑150 (MQ=255)
                                                                                                                    ccACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTa                             <  2:1163/150‑1 (MQ=255)
                                                                                                                     cACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGCAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTAc                            >  2:325341/1‑150 (MQ=255)
                                                                                                                     cACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTAc                            >  1:1337655/1‑150 (MQ=255)
                                                                                                                        gATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGt                         >  2:1158094/1‑150 (MQ=255)
                                                                                                                        gATCAACGACTCGGTCGAAACGACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACGGAAAGCGGCGTGATCACTTACACCCTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGt                         >  2:1330899/1‑150 (MQ=14)
                                                                                                                          tCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGAGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTg                       >  1:1230406/1‑150 (MQ=255)
                                                                                                                           cAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCCGTAACCGTGGCCCTGTCCAACGGCCAAACGATTACCGTTGa                      >  2:618565/1‑150 (MQ=255)
                                                                                                                            aaCGGCTCGGTCGACACGACGACCGCTACCCCGACGGGGAGTTTGTGGGTCACGGATGGGGGCGTGATCGAGTACTCCGTGAGCCTGGGCACTCCTGCCCTGCCGCCCGTTATCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGaa                     <  2:515122/150‑1 (MQ=2)
                                                                                                                            aaCGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGaa                     <  2:1337655/150‑1 (MQ=255)
                                                                                                                            aaCGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGaa                     >  2:907856/1‑150 (MQ=255)
                                                                                                                                aCTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCgg                 <  1:1158094/150‑1 (MQ=255)
                                                                                                                                 cTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCggg                >  2:508812/1‑150 (MQ=255)
                                                                                                                                    ggTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTaa             >  1:149056/1‑150 (MQ=255)
                                                                                                                                       cgatgccaccaccGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAAc          <  1:184844/145‑1 (MQ=255)
                                                                                                                                       cGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAAc          <  2:781284/150‑1 (MQ=255)
                                                                                                                                        gACACCACCACCGCGACCCTGACGTCGTGCCCGTCAGTCACCGAAGGCCGCCTGATTATTTACACCGTCACCCTGACTAACCCTACCCAGACGTCTGTAACCGTAATCCTAGCCACCGGCCAAACGATTACCGTTGAAGCGGGTAAAAcc         <  2:423864/150‑1 (MQ=11)
                                                                                                                                         acacCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAAccc        >  2:1300165/1‑150 (MQ=255)
                                                                                                                                           accactaccGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCAGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGATGAAGCGGGTAAAACCCAg      >  2:115114/1‑150 (MQ=255)
                                                                                                                                            ccactaccGCGACCCTGACGGCGAGCCCGTCCGTCACCGAAGGCGCCGTGATCACTTACACCGTCACCCTAAGCAACCCCGCCCAAACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACAATTCCCGTTGACGCGTGTAAAACCCAgg     <  2:761912/150‑1 (MQ=14)
                                                                                                                                            ccaccaccGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGAACCCACACTGGTCCAGCGGCCAAACGACTACTGTTGAAGCGGGTAAAACCCAgg     >  2:1089552/1‑150 (MQ=14)
                                                                                                                                              accaccGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCt                                                                                     <  2:951225/68‑1 (MQ=35)
                                                                                                                                              accaccGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAACCCAGGGc   >  1:868939/1‑150 (MQ=255)
                                                                                                                                               ccaccGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGCCGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAACCCAGGGCa  <  1:556322/150‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                                    
TTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAACCCAGGGCA  >  NC_002947/195490‑195782

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑