New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5147833 | NA (NA) | 7 (0.230) | 7/252 | 2.7 | 100% | coding (890/1302 nt) | mscMB | miniconductance mechanosensitive channel protein |
? | NC_002947 | = 5147853 | 0 (0.000) | coding (910/1302 nt) | mscMB | miniconductance mechanosensitive channel protein |
TCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCTGAGCCAGGTGCAGCTACTGAGTGACTAcctggcg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5147694‑5147833 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCTGGCGCTTGCCCGCCAGGTAGTCACTCAGTAGCTGCACCTGGCTCAGGCGCTGTTCTTCTTCGCGGGTGAGGAAGCGCACGCCGGCGGCGTCGATGAACAGGCTGCGCTTGATGCGCCGGCCACCGGACTGCTGCATGCCGCGGTAATTGCG < NC_002947/5147853‑5147700 TCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCTGAGCCAGGTGCAGCTACTGAGTGACTACCTGGCGCTT > 2:372042/1‑150 AATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCTGAGCCAGGTGCAGCTACTGAGTGACTACCTGGCGCTTGCCCGCCAG < 1:372042/150‑1 GCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCTGAGCCAGGTGCAGCTACTGAGTGACTACCTGGCGCTTGCCCGCCAGGTAGTCA < 1:92518/150‑1 GCTTCCTCACCCGCGAAGAAGAACAGCGCCTGAGCCAGGTGCAGCTACTGAGTGACTACCTGGCGCTTGCCCGCCAGGTAGTC > 1:463476/1‑83 GCTTCCTCACCCGCGAAGAAGAACAGCGCCTGAGCCAGGTGCAGCTACTGAGTGACTACCTGGCGCTTGCCCGCCAGGTAGTC < 2:463476/83‑1 GCAGCTACTGAGTGACTACCTGGCGGGCAAGCGCCAGGTAGTCACTCAGTAGCTGCACCTGGCTCAGGCGCTGTTCTTCTTCGCGGGTGAGGAAGCGCACGCCGGCGGCGTCGATGAACAGGCTGCGCTTGATGCGCCGGCCACCGGACT > 1:806457/1‑150 GCTACTGAGTGACTACCTGGCGGGCAAGCGCCAGGTAGTCACTCAGTAGCTGCACCTGGCTCAGGCGCTGTTCTTCTTCGCGGGTGAGGAAGCGCACGCCGGCGGCGTCGATGAACAGGCTGCGCTTGATGCGCCGGCCACCGGACTGCT < 2:806457/150‑1 GCGCTTGCCCGCCAGGTAGTCACTCAGTAGCTGCACCTGGCTCAGGCGCTGTTCTTCTTCGCGGGTGAGGAAGCGCACGCCGGCGGCGTCGATGAACAGGCTGCGCTTGATGCGCCGGCCACCGGACTGCTGCATGCCGCGGTAATTGCG < 1:255996/150‑1 TCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCTGAGCCAGGTGCAGCTACTGAGTGACTAcctggcg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5147694‑5147833 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCTGGCGCTTGCCCGCCAGGTAGTCACTCAGTAGCTGCACCTGGCTCAGGCGCTGTTCTTCTTCGCGGGTGAGGAAGCGCACGCCGGCGGCGTCGATGAACAGGCTGCGCTTGATGCGCCGGCCACCGGACTGCTGCATGCCGCGGTAATTGCG < NC_002947/5147853‑5147700 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |