| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5538592 = | 34 (1.040) | 7 (0.250) | 6/224 | 2.7 | 21.7% | intergenic (+34/+87) | PP_4871/PP_4872 | lysine decarboxylase family protein/hypothetical protein |
| ? | NC_002947 | 5538647 = | 22 (0.800) | intergenic (+89/+32) | PP_4871/PP_4872 | lysine decarboxylase family protein/hypothetical protein | |||||
AGCAGGCTGCCAAGGAGCGCAAAGAGGCGAGCAAGGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5538761‑5538592‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggagcggccttgtgtcgcgaTGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTACGCGCAAACGCCTCGGCCTTGGCCTTTT > NC_002947/5538647‑5538794 AGCAGGCTGCCAAGGAGCGCAAAGAGGCGAGCAAGGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTG < 1:61161/150‑1 AGGCTGCCAAGGAGCGCAAAGAGGCGAGCAAGGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGA < 2:723498/150‑1 GGAGCGCAAAGAGGCGAGCAAGGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGT > 2:96352/1‑150 AAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGG < 1:79385/101‑1 AAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGG > 2:79385/1‑101 CGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCTCAAGAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCC < 2:608866/112‑1 CGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCC > 1:608866/1‑112 TCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCT > 2:271107/1‑150 TCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTC < 1:30965/64‑1 TCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTC > 2:30965/1‑64 CCATTGCCTTTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGA > 1:124146/1‑62 CCATTGCCTTTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGA < 2:124146/62‑1 GCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGGATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTG > 1:288320/1‑120 GCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGGATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTG < 2:288320/120‑1 CGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTACGCGCAAACGCCTCGGCCTTGGCCTTT < 2:266445/150‑1 GATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTACGCGCAAACGCCTCGGCCTTGGCCTTTT > 1:522036/1‑150 AGCAGGCTGCCAAGGAGCGCAAAGAGGCGAGCAAGGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5538761‑5538592‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggagcggccttgtgtcgcgaTGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTACGCGCAAACGCCTCGGCCTTGGCCTTTT > NC_002947/5538647‑5538794 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |