| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5914240 | 15 (0.460) | 11 (0.420) | 8/210 | 2.0 | 40.1% | intergenic (+76/+77) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase |
| ? | NC_002947 | = 5914280 | 21 (0.810) | intergenic (+116/+37) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase | |||||
CTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCG > NC_002947/5914132‑5914415 | cTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTg > 2:497194‑M2/1‑149 (MQ=255) tCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCTGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTgg > 1:101285‑M2/1‑148 (MQ=255) gctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggtCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTGGGa > 1:306619‑M1/79‑150 (MQ=255) aGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTgggag > 2:365071‑M2/1‑145 (MQ=255) ggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTGGGCGCGGGc > 2:76984‑M1/73‑150 (MQ=255) ggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTGGGAGCGGGc > 1:693875‑M1/73‑150 (MQ=255) aaCTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑GGTgggagcgggc < 1:168673‑M2/150‑11 (MQ=255) cTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTgggagcgggcgt > 2:168673‑M2/1‑138 (MQ=255) ttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGG‑TAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTgg > 2:606471‑M1/61‑129 (MQ=255) ttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGG‑TAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTgg < 1:606471‑M1/69‑1 (MQ=255) aTACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCCAAGGCTGAAGCCTGTGAC‑TTACC‑TGTgggagcgggcgtgcccgcgaaga > 2:403683‑M2/1‑127 (MQ=255) cGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTgggagcgggcgtgcccgcgaagagggc < 1:427923‑M2/150‑28 (MQ=255) aaCGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCa > 2:165340/1‑150 (MQ=255) gccgccCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTgg > 1:83689‑M2/1‑108 (MQ=255) gccgccCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTgg < 2:83689‑M2/110‑3 (MQ=255) gccgccCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTg > 1:781407‑M2/1‑108 (MQ=255) gccgccCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTg < 2:781407‑M2/109‑2 (MQ=255) cAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTtctc < 2:662155/150‑1 (MQ=255) cAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTtctc < 2:427923/150‑1 (MQ=255) gcggcgTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTAc < 2:545492/134‑1 (MQ=255) gcggcgTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTAc > 1:545492/1‑134 (MQ=255) agaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTgg < 1:405276‑M1/70‑1 (MQ=255) agaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTgg > 2:405276‑M1/23‑92 (MQ=255) gTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTc > 2:479805/1‑150 (MQ=255) tttgtttgAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGaa > 2:150530/1‑150 (MQ=255) aCCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTgggagcgggcgt < 1:732479‑M2/88‑13 (MQ=255) aCCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTgggagcgggcgt > 2:732479‑M2/1‑76 (MQ=255) cGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCAAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAg > 2:369789/1‑150 (MQ=255) gtgtCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑tgt > 2:488914/1‑72 (MQ=255) gtgtCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑tgt < 1:488914/72‑1 (MQ=255) gtCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTGGGAGTGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGt > 2:203638/1‑150 (MQ=255) gCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTgggagcgg < 2:460695‑M2/75‑9 (MQ=255) gCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTgggagcgg > 1:460695‑M2/1‑67 (MQ=255) GCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACa < 1:696837‑M1/150‑1 (MQ=255) GCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACa < 2:772912‑M1/150‑1 (MQ=255) CCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAg < 2:304527‑M1/150‑1 (MQ=255) CCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAg > 2:461150‑M1/1‑150 (MQ=255) TTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAg < 2:85127‑M1/150‑1 (MQ=255) GCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGccc > 2:696837‑M1/1‑150 (MQ=255) aCGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtaccag < 2:84517‑M2/150‑99 (MQ=255) cccGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtacca > 2:572757‑M2/1‑49 (MQ=255) cccGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtacca < 1:572757‑M2/146‑98 (MQ=255) CCGCTTCCGCAGGGTAATCTCGAAGGTTTAAGCCTGTTAC‑TTACG‑TGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCgg > 1:231141‑M1/1‑150 (MQ=255) TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGc < 2:754573‑M1/150‑1 (MQ=255) CGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGc < 2:565473‑M1/150‑1 (MQ=255) gCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtaccagttgtactcgagg < 1:570124‑M2/150‑111 (MQ=255) gCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtaccagttgtactcgagg < 2:537955‑M2/150‑111 (MQ=255) gCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcg > 2:225954‑M2/1‑40 (MQ=255) gCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcg < 1:225954‑M2/106‑67 (MQ=255) gCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaac > 1:223352‑M2/1‑40 (MQ=255) gCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaac < 2:223352‑M2/89‑50 (MQ=255) ggTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCAGCGCCGCCGGCAGCCGCTCCAc < 1:772912/150‑1 (MQ=255) gTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACg > 2:199052/1‑150 (MQ=255) tAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGTAGTCCGCGCCGCCGGCAGCCGCTCCACGc < 1:150530/150‑1 (MQ=255) tttCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCtt > 2:339147/1‑91 (MQ=255) tttCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCtt < 1:339147/91‑1 (MQ=255) tttCGAAGGCTGAAGCCTGTGAAATTACCCTGCgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtaccagttgtactcgaggtcggaga < 2:483630‑M2/150‑118 (MQ=255) gAAGGCTGAAGCCTGTGAC‑TTACC‑TGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtaccagttgtactcgaggtcggagatcgagt > 1:537955‑M2/1‑27 (MQ=255) gCTGAAGCCTGTGAC‑TTACC‑TGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCa > 2:239838/1‑150 (MQ=255) tGAAGCCTGTGAC‑TTACC‑TGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCaaa > 2:686295/1‑150 (MQ=255) cTGTGAC‑TTACC‑TGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCcgcg > 2:406806/1‑150 (MQ=255) c‑TGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCa < 2:570767/117‑1 (MQ=255) c‑TGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCa > 1:570767/1‑117 (MQ=255) gtgGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGc < 2:640068/118‑1 (MQ=255) gtgGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGc > 1:640068/1‑118 (MQ=255) | CTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAC‑TTACC‑TGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCG > NC_002947/5914132‑5914415 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |