| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6032808 = | 33 (1.010) | 11 (0.450) | 12/200 | 1.1 | 32.4% | intergenic (+16/+120) | dppA‑IV/PP_5284 | dipeptide transport protein/hypothetical protein |
| ? | NC_002947 | 6032890 = | 21 (0.850) | intergenic (+98/+38) | dppA‑IV/PP_5284 | dipeptide transport protein/hypothetical protein | |||||
GGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCC > NC_002947/6032741‑6033024 | ggTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGaaa < 1:8998/150‑1 (MQ=255)ggTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGaaa > 2:325335/1‑150 (MQ=255) ggtcgagcatgggtggattgtggtctgagggagtactgagagccttatagggtcagtacgggccctttcgcgggtaaacccgctcctacaggggtagcgtcaactgccaggctggcgctacccctgtaggagcgggtttacccgcgaaAg > 1:419280‑M2/149‑150 (MQ=255) tcgagcatgggtggattgtggtctgagggagtactgagagccttatagggtcagtacgggccctttcgcgggtaaacccgctcctacaggggtagcgtcaactgccaggctggcgctacccctgtaggagcgggtttacccgcgaaAggg < 2:419280‑M2/4‑1 (MQ=255) cccGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGccc > 2:320532/1‑150 (MQ=255) gTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTa > 2:641284/1‑150 (MQ=255) ggcggcTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGAc < 1:320532/150‑1 (MQ=255) ggcggcTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGAc < 1:622546/150‑1 (MQ=255) cTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCCCCTACAGGGGTAGCGCCAGCCCGACAGT‑TGACGCTACCCCTGTACGACCGGGCTTACCCGAGAAAGGACCAGTACTGACCCtat > 2:113010/1‑150 (MQ=38) ggATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGCACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTCCCCCTGTAGGAGCGGGTTGACCCGCGAAAGGGCCCGTACTGACCCTATaa < 2:139521/150‑1 (MQ=255) aTTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAgg < 1:620270/150‑1 (MQ=255) aTTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAgg < 2:44689/150‑1 (MQ=255) ttCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGct < 2:355137/150‑1 (MQ=255) ccTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCCGTCGGCGCGGGTTTACCCGGTAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCAc < 1:305953/150‑1 (MQ=39) cTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCAcc > 1:544594/1‑150 (MQ=255) gTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTTCCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGAc < 1:393028/108‑1 (MQ=255) gTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGAc > 2:393028/1‑108 (MQ=255) ggCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCa > 2:605375/1‑129 (MQ=255) ggCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCa < 1:605375/129‑1 (MQ=255) ccctTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGa < 2:419280‑M1/146‑1 (MQ=255) ccTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGa < 1:325335/150‑1 (MQ=255) ctTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGAcc > 1:419280‑M1/3‑150 (MQ=255) GTAAACCCGCTCCTACAGGGGTAGCGTCAAC‑TGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAAc < 1:162922‑M1/150‑1 (MQ=255) TCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCAt < 2:575075‑M1/150‑1 (MQ=255) TACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCAc > 2:574955‑M1/1‑150 (MQ=255) AGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCaa > 1:641284‑M1/1‑150 (MQ=255) gtagcgtcaactgccaggctggcgctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGAc > 2:690390‑M2/56‑120 (MQ=255) gtagcgtcaactgccaggctggcgctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGAc < 1:690390‑M2/65‑1 (MQ=255) agcgtcaactgccaggctggcgctaccactgtaggagcgggtttacccgcgaaAGGGCACGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAatgatga > 1:727702‑M2/54‑150 (MQ=255) GCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAatgatgat > 1:243972‑M1/1‑150 (MQ=255) GCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAatgatgat < 1:403114‑M1/150‑1 (MQ=255) gcgtcaactgccaggctggcgctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCa > 2:353310‑M2/53‑82 (MQ=255) gcgtcaactgccaggctggcgctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCa < 1:353310‑M2/30‑1 (MQ=255) gtcaactgccaggctggcgctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGAtgt > 1:44189‑M2/51‑150 (MQ=255) cAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGa > 1:431603/1‑150 (MQ=255) aactgccaggctggcgctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATaa > 1:62723‑M2/48‑69 (MQ=255) aactgccaggctggcgctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATaa < 2:62723‑M2/22‑1 (MQ=255) tgccaggctggcgctacccctgtaggagcgggtttacccgcgaaAGCGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCa < 2:44189‑M2/106‑1 (MQ=255) gT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCa < 1:447098/144‑1 (MQ=255) gT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCa > 2:447098/1‑144 (MQ=255) ccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGctct < 2:487473‑M2/28‑1 (MQ=255) ccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGctct > 1:487473‑M2/28‑55 (MQ=255) gcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGcc > 1:497855‑M2/18‑150 (MQ=255) gggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGcccc > 1:162892‑M2/16‑150 (MQ=255) gtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAAc < 1:22202‑M2/75‑1 (MQ=255) gtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAAc > 2:22202‑M2/14‑88 (MQ=255) | GGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCC > NC_002947/6032741‑6033024 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |