New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3795313 | 18 (1.110) | 3 (0.190) | 3/248 | NT | 16.9% | coding (1184/1884 nt) | fcs | feruloyl‑CoA‑synthetase |
? | NC_002947 | = 3795375 | 12 (0.770) | coding (1122/1884 nt) | fcs | feruloyl‑CoA‑synthetase |
CCTCGGCGGTCTGCTGCGGCGAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGCGCCTCGAGCTTGTCGCCCACCGGCACCAGCTTCACTTCGCAGCCAGGTGCCGGCAGCCCGACATAGCCGGCCATCGACAAAGGCCCGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3795161‑3795313 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggCGAACGCATCCGCATGATGGCCGGCCTTGGCATGACCGAAGCCTCGCCATCGTGCACCTTCACCACCG < NC_002947/3795375‑3795308 CCTCGGCGGTCTGCTGCGGCGAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGCGCCTCGAGCTTGTCGCCCACCGGCACCAGCTTCACTTCGCAGCCCGGTGCCGGCAGCCCGACATAGCCGGCCATCGCCAAAGGCCAGG > 2:101851/1‑150 CTCGGCGGTCTGCTGCGGCGAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGCGCCTCGAGCTTGTCGCCCACCGGCACCAGCTTCACTTCGCAGCCAGGTGCCGGCAGCCCGACATAGCCGGCCATCGACAAAGGCCCGGT > 1:290583/1‑150 TTGTCGCCCACCGGCACCAGCTTCACTTCGCAGCCAGGTGCCGGCAGCCCGACATAGCCGGCCATCGACAAAGGCCCGGTGGCGAACGCATCCGCATGATGGCCGGCCTTGGCATGACCGAAGCCTCGCCATCGTGCACCTTCACCACCG < 2:225946/150‑1 CCAGGTGCCGGCAGCCCGACATAGCCGGCCATCGACAAAGGCCCGGTGGCGAACGCATCCGCATGATGGCCGGCCT < 1:98562/76‑1 CCAGGTGCCGGCAGCCCGACATAGCCGGCCATCGACAAAGGCCCGGTGGCGAACGCATCCGCATGATGGCCGGCCT > 2:98562/1‑76 CCTCGGCGGTCTGCTGCGGCGAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGCGCCTCGAGCTTGTCGCCCACCGGCACCAGCTTCACTTCGCAGCCAGGTGCCGGCAGCCCGACATAGCCGGCCATCGACAAAGGCCCGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3795161‑3795313 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggCGAACGCATCCGCATGATGGCCGGCCTTGGCATGACCGAAGCCTCGCCATCGTGCACCTTCACCACCG < NC_002947/3795375‑3795308 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |