| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5822883 = | 16 (0.990) | 4 (0.260) | 4/246 | NT | 19.8% | coding (356/597 nt) | rdgB | dITP/XTP pyrophosphatase |
| ? | NC_002947 | 5822920 = | 17 (1.090) | coding (393/597 nt) | rdgB | dITP/XTP pyrophosphatase | |||||
GGGTCGTCGGCGTGGCGCACCAGCGCCAGAACGCAGACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5822922‑5822883‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgaCCCGTTGCCGATCCTGTGCGAAGGCCTGTGGCACGGGCGCATCCTGTTCGAGGCCAGCGGCGACCAGGGCTTTGGCTACGATCCGCTGTTCTGG > NC_002947/5822920‑5823013 GGGTCGTCGGCGTGGCGCACCAGCGCCAGAACGCAGACGACCCGTTGCCGATCCTGTGCGAAGGCCTGTGGCACGGGCGCATCCTGTTC > 1:182514/1‑89GGGTCGTCGGCGTGGCGCACCAGCGCCAGAACGCAGACGACCCGTTGCCGATCCTGTGCGAAGGCCTGTGGCACGGGCGCATCCTGTTC < 2:182514/89‑1 GTCGTCGGCGTGGCGCACCAGCGCCAGAACGCAGACGACCCGTTGCCGATCCTGTGCGAAGGCCTGTGGCACGGGCGCATCCTGTTCGAGGCCAGCGGCGACCAGGGCTTTGGCTACGATCCGCTGTTCTGG < 1:210574/132‑1 GTCGTCGGCGTGGCGCACCAGCGCCAGAACGCAGACGACCCGTTGCCGATCCTGTGCGAAGGCCTGTGGCACGGGCGCATCCTGTTCGAGGCCAGCGGCGACCAGGGCTTTGGCTACGATCCGCTGTTCTGG > 2:210574/1‑132 GGGTCGTCGGCGTGGCGCACCAGCGCCAGAACGCAGACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5822922‑5822883‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgaCCCGTTGCCGATCCTGTGCGAAGGCCTGTGGCACGGGCGCATCCTGTTCGAGGCCAGCGGCGACCAGGGCTTTGGCTACGATCCGCTGTTCTGG > NC_002947/5822920‑5823013 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |