| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 467954 | 16 (0.990) | 4 (0.260) | 4/246 | NT | 20.8% | coding (3006/3744 nt) | PP_0386 | sensory box protein |
| ? | NC_002947 | = 467971 | 15 (0.960) | coding (2989/3744 nt) | PP_0386 | sensory box protein | |||||
CCCAGTCGCCGAGCTGCAGGATGGTGCCGTTCTCTTCCGCCAAGTGGATGAAGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCCCTTGGCCTTGGAGCGGTAC > NC_002947/467815‑468098 | cccAGTCGCCGAGCTGCAGGATGGTGCCGTTCTCTTCCGCCAAGTGGATGAAGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGa > 2:157332/1‑150 (MQ=255) cTGCAGGATGGTGCCGTTCTCTTCAGACACTTTGATGAAGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCctgtgcttccagcccaagctcag < 2:390310‑M1/150‑24 (MQ=255) tGGTGCCGTTCTCTTCCGCCAAGTGGATGAAGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCCTGTGCTTCCAGCCCAAgctcagcctgaaga > 2:270453‑M2/1‑136 (MQ=255) ttCTCTTCCTCCAAGTGGATGAAGTGTTCCGGGGGAACCACGCCAAAAGTCGCGTGCCTCCAGCGGATCAGCGCCTCCGCATCCACCAGGCTCCGCGAATTCAGGTTCCGCCTGATCCGATAGCAAGGGCTCATTTCGCGGCTTTCGCCg < 2:51407/150‑1 (MQ=255) tctcTTCCGCCAAGTGGATGAAGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACgg > 1:399064/1‑150 (MQ=255) tGGATGAAGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCa < 2:164568/150‑1 (MQ=255) tgtTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAgg > 1:277897/1‑150 (MQ=255) tgtTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAgg < 1:417610/150‑1 (MQ=255) gcggTACCTCGCCAAAGGTCGGGTGGCTCGAGCGGATCAGCGCTTCGGGACCCACCAGGCTGTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGACCGGCGCAGCTCATGCTCCAGGGCGATgc > 1:159477/1‑150 (MQ=255) ccTCGCCAAAGGTCGGGAGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGTGCTTGGGCTGGAAGCACAGGATCATTTCGTTGGGTTCGACGGCCCGGCGCCGCGCCTGCTCCAGGGCGATGcgcccgc > 2:45319/1‑150 (MQ=255) cTCGCCAAAGGTCGGGGGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGTGTTCGACGGCCCGGCGCAGCCCATGCTCCACGGCGGTGcgctcgct > 2:21199/1‑150 (MQ=255) gCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTAGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGc > 2:423692/1‑150 (MQ=255) cAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCt < 2:300874/150‑1 (MQ=255) aGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTggg < 1:347297/150‑1 (MQ=255) gTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAg < 2:399064/150‑1 (MQ=255) aGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCctgtgcttccagcccaagctcagc > 1:425160‑M1/1‑50 (MQ=255) aGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCctgtgcttccagcccaagctcagc < 2:425160‑M1/74‑25 (MQ=255) ggCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGAcgcg < 1:157332/150‑1 (MQ=255) acccaccAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGtt < 1:406049/150‑1 (MQ=255) accaGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTAGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTTGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCgg < 1:423692/150‑1 (MQ=255) tCTTCAGGCTGAGCttgggctggaagcacaggctcagcctgaagacccagagcctggtgggtgccgaagcgctgatccgctggagccacccgacctttggcgaggtaccgccggaacacttcatccacttggcggaagagaacggcacca > 2:270453‑M1/1‑14 (MQ=255) gCTGAGCTTGGGCTGGAAGCACAGgctcagcctgaagacccagagcctggtgggtgccgaagcgctgatccgct > 1:425160‑M2/1‑24 (MQ=255) gCTGAGCTTGGGCTGGAAGCACAGgctcagcctgaagacccagagcctggtgggtgccgaagcgctgatccgct < 2:425160‑M2/74‑51 (MQ=255) cTGAGCTTGGGCTGGAAGCACAGgctcagcctgaagacccagagcctggtgggtgccgaagcgctgatccgctggagccacccgacctttggcgaggtaccgccggaacacttcatcaaagtgtctgaagagaacggcaccatcctgcag < 2:390310‑M2/150‑128 (MQ=255) | CCCAGTCGCCGAGCTGCAGGATGGTGCCGTTCTCTTCCGCCAAGTGGATGAAGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCCCTTGGCCTTGGAGCGGTAC > NC_002947/467815‑468098 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |