New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1219553 = | 15 (0.930) | 4 (0.260) | 4/244 | NT | 25.6% | coding (1084/1137 nt) | PP_1064 | alpha/beta family hydrolase |
? | NC_002947 | 1219580 = | 9 (0.580) | coding (1111/1137 nt) | PP_1064 | alpha/beta family hydrolase |
TGGTACACGGCACGGCTGATCCGTTATTGCCGGTGATGCATGGCGTGCACTTGGCGGCGCATATCCGGGGCAGCCAGTTGCGCTTGATCCCGGGGCTGGCGCACCGTTTCCAGGAGCCGTTCAAGGCGCCGTTACTGGGGGCGGTGTTGCCTTATTTGCAGGCGCACAGGCAAGAGGTCACGCACATCGCAGGGCTCTGAATCGGCGTCGATTTCGCTCAGTGCATCCGCACCCACACAGTCACCAGCA > NC_002947/1219407‑1219655 | tggtACACGGCACGGCTGATCCGTTATTGCCGGTGATGCATGGCGTGCACTTGGCGGCGCATATCCGGGGCAGCCAGTTGCGCTTGATCCCGGGGCTGGCGCACCGTTTCCAGGAGCCGTTCAAGGCGCCGTTACTGGGGGCGGTGTTGc < 1:24913/150‑1 (MQ=255) cggcacggcTGATCCGTTATTGCCGGTGATGCATGGCGTGCACTTGGCGGCGCATATCCGGGGCAGCCAGTTGCGCTTGATCCCGGGGCTGGCGCACCGTTTCCAGGAGCCGTTCAAGGCGCCGTTACTGGGGGCGGTGTTGCCTTAttt < 1:306955/150‑1 (MQ=255) ggcacggcTGATCCGTTATTGCCGGTGATGCATGGCGTGCACTTGGCGGCGCATATCCGGGGCAGCCAGTTGCGCTTGATCCCGGGGCTGGCGCACCGTTTCCAGGAGCCGTTCAAGGCGCCGTTACTGGGGGCGGTGTTGCCTTATTTg > 2:343347/1‑150 (MQ=255) ggcTGATACGTTATTGCCGGTGATGCATGGCGTGCACTTGGCGGCGCATATCCGGGGCAGCCAGTTGCGCTTGATCCCGGGGCTGGCGCACCGTTTCCAGGAGCCGTTCAAGGCGCCGTTACTGGGGGCGGTGTTGCCTTATTTGCAGgc > 2:314251/1‑150 (MQ=255) aTCCGTTATTGCCGGTGATGCATGGCGTGCACTTGGCGGCGCATATCCGGGGCAGCCAGTTGCGCTTGATCCCGGGGCTGGCGCACCGTTTCCAGGAGCCGTTCAAGGCGCCGTTACTGGGGGCGGTGTTGCCTTATTTGCAGGCGcaca > 1:355418/1‑150 (MQ=255) tcgaggcttcgatggcgctggccacagtggcctggctgatcgccgcgaccgtgctggtgactgtgtgggtgcggatgcactgagcgaaatcgacgccgattcagagccctgcgatgtgcgtgacctcTTGCCTTATTTGCAGGCGCACAg < 1:234231‑M1/23‑1 (MQ=255) ccGTTATTGCCGGTGATGCATGGCGTGCACTTGGCGGCGCATATCCGGGGCAGCCAGTTGCGCTTGATCCCGGGGCTGGCGCACCGTTTCCAGGAGCCGTTCAAGGCGCCGTTACTGGGGGCGGTGTTGCCTTATTTGCAGGCGCACAgg > 2:19535/1‑150 (MQ=255) cGGTGATGCATGGCGTGCACTTGGCGGCGCATATCCGGGGCAGCCAGTTGCGCTTGATCCCGGGGCTGGCGCACCGTTTCCAGGAGCCGTTCAAGGCGCCGTTACTGGGGGCGGTGTTGCCTTATTTGCAGGCGCACAGGCAAGAGGTCa < 2:355418/150‑1 (MQ=255) gTGATGCATGGCGTGCACTTGGCGGCGCATATCCGGGGCAGCCAGTTGCGCTTGATCCCGGGGCTGGCGCACCGTTTCCAGGAGCCGTTCAAGGCGCCGTTACTGGGGGCGGTGTTGCCTTATTTGCAGGCGCACAGGCAAGAGGTCACg > 2:332895/1‑150 (MQ=255) ggccacagtggcctggctgatcgccgcgaccgtgctggtgactgtgtgggtgcggatgcactgagcgaaatcgacgccgattcagagccctgcgatgtgcgtgacctcTTGCCTTATTTGCAGGCGCACAGGCAAGAGGTCACGCACATc > 2:234231‑M1/109‑150 (MQ=255) aTGGCGTGCACTTGGCGGCGCATATCCGGGGCAGCCAGTTGCGCTTGATCCCGGGGCTGGCGCACCGTTTCCAGGAGCCGTTCAAGGCGCCGTTACTGGGGGCGGTGTTGc < 2:62777/111‑1 (MQ=255) aTGGCGTGCACTTGGCGGCGCATATCCGGGGCAGCCAGTTGCGCTTGATCCCGGGGCTGGCGCACCGTTTCCAGGAGCCGTTCAAGGCGCCGTTACTGGGGGCGGTGTTGc > 1:62777/1‑111 (MQ=255) tatCCGGGGCAGCCAGTTGCGCTTGATCCCGGGGCTGGCGCCCAGGGCCGAGGAGCCGTTCAAGGCGCCGTTACTGGGGGCGGTGTTGCCTTATTTGCAGGCGCACAGGCAAGAGGGCACTCACATCGCAGGGCTCTGAATCGGCGTCGa > 2:63060/1‑150 (MQ=255) atCCGGGGCAGCCAGTTGCGCTTGATCCCGGGGCTGGCGCACCGTTTCCAGGAGCCGTTCAAGGCGCCGTTACTGGGGGCGGTGTTGCCTTATTTGCAgg > 2:100315/1‑100 (MQ=255) atCCGGGGCAGCCAGTTGCGCTTGATCCCGGGGCTGGCGCACCGTTTCCAGGAGCCGTTCAAGGCGCCGTTACTGGGGGCGGTGTTGCCTTATTTGCAgg < 1:100315/100‑1 (MQ=255) aGTTGCGCTTGATCCCGGGGCTGGCGCACCGTTTCCAGGAGCCGTTCAAGGCGCCGTTACTGGGGGCGGTGTTGCCTTATTTGCAGGCGCACAGGCAAGAGGTCACGCACATCGCAGGGCTCTGAATCGGCGTCGATTTCGCTCAGTGCa < 1:314251/150‑1 (MQ=255) ttGATCCCGGGGCTGGCGCACCGTTTCCAGGAGCCGTTCAAGGCGCCGTTACTGGGGGCGGTGTTGCCTTATTTGCAGGCGCACAGGCAAGAGGTCACGCACATCGCAGGGCTCTGAATCGGCGTCGATTTCGCTCAGTGCATCCGCAcc < 1:332895/150‑1 (MQ=255) cgcACCGTTTCCAGGAGCCGTTCAAGGCGCCGTTACTGGGGGCGGTGTTGCCTTATTTGCAGGCGCACAGGCAAGAGGTCACGCACATCGCAGGGCTCTGAATCGGCGTCGATTTCGCTCAGTGCATCCGCACCCACACAGTCACCAGCa > 1:168937/1‑150 (MQ=255) aaatcgacgccgattcagagccctgcgatgtgcgtgacctcTTGCCTTATTTGCAGGCGCACAGGCAaga > 2:158340‑M1/42‑70 (MQ=255) aaatcgacgccgattcagagccctgcgatgtgcgtgacctcTTGCCTTATTTGCAGGCGCACAGGCAaga < 1:158340‑M1/29‑1 (MQ=255) cgcCGTTACTGGGGGCGGTGTTGCCTTATTTGCAGGCGCACAGGCAAGAGGTCACGCACATCGCa < 1:439366/65‑1 (MQ=255) cgcCGTTACTGGGGGCGGTGTTGCCTTATTTGCAGGCGCACAGGCAAGAGGTCACGCACATCGCa > 2:439366/1‑65 (MQ=255) | TGGTACACGGCACGGCTGATCCGTTATTGCCGGTGATGCATGGCGTGCACTTGGCGGCGCATATCCGGGGCAGCCAGTTGCGCTTGATCCCGGGGCTGGCGCACCGTTTCCAGGAGCCGTTCAAGGCGCCGTTACTGGGGGCGGTGTTGCCTTATTTGCAGGCGCACAGGCAAGAGGTCACGCACATCGCAGGGCTCTGAATCGGCGTCGATTTCGCTCAGTGCATCCGCACCCACACAGTCACCAGCA > NC_002947/1219407‑1219655 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |