New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3724527 =	11 (0.680)	3 (0.200)	3/242	NT	22.7%	coding (54/927 nt)	PP_3290	universal stress protein family protein
	?	NC_002947	3724571 =	10 (0.650)					coding (98/927 nt)	PP_3290	universal stress protein family protein

ATCCTGCGCGCGGAATATCGTCAGCATCACACCCACTGACGAAAGCGCGGAGGTTCACCATGGGGCAATATCGACAATTGCTGGTGCTGCTGACCGAGGTCGATCCGCATTCCGCCGCTTTGCGCCGAGCCCTTGCCTTGGCGCAAGTCAGCGGCGCCAGCGTGCATGTGCTGGGCTTGTTCGAGCCAAGCGAGGAGCACCTTCTGCGCGAAGAGCGGCTGAACGAGGCCGATATCAAGCGCCAGTACCAGC  >  NC_002947/3724415‑3724666                                                                                                                 |                                                                                                                                            aTCCTGCGCGCGGAATATCGTCAGCATCACACCCACTGACGAAAGCGCGGAGGTTCACCATGGGGCAATATCGACAATTGCTGGTGCTGCTGACCGAGGTCGATCCGCATTCCGCCGCTTTGCGCCGAGCCCTTGCCTTGGCGCAAGTCa                                                                                                        <  1:85983/150‑1 (MQ=255)                         tggcgcttgatatcggcctcgttcagccgctcttcgcgcagaaggtgctcctcgcttggctcgaacaagcccagcacatgcacgctggCGCCGCTTTGCGCCGAGCCCTTGCCTTGGCGCAAGTCAGCGGCGCCAGCGTGCATGTGCTgg                                                                                >  1:114980‑M1/89‑150 (MQ=255)                         cATCACACCCACTGACGAAAGCGCGGAGGTTCACCATGGGGCAATATCGACAATTGCTGGTGCTGCTGACCGAGGTCGATCCGCATTCCGCCGCTTTGCGCCGAGCCCTTGCCTTGGCGCAAGTCAGCGGCGCCAGCGTGCATGTGCTgg                                                                                <  2:198557/150‑1 (MQ=255)                                 gatatcggcctcgttcagccgctcttcgcgcagaaggtgctcctcgcttggctcgaacaagcccagcacatgcacgctggCGCCGCTTTGCGCCGAGCCCTTGCCTTGGCGCAAGTCAGCGGCGCCAGCGTGCAtgt                                                                                     <  1:259376‑M1/57‑1 (MQ=255)                                 gatatcggcctcgttcagccgctcttcgcgcagaaggtgctcctcgcttggctcgaacaagcccagcacatgcacgctggCGCCGCTTTGCGCCGAGCCCTTGCCTTGGCGCAAGTCAGCGGCGCCAGCGTGCAtgt                                                                                     >  2:259376‑M1/81‑137 (MQ=255)                                 ccACTGACGAAAGCGCGGAGGTTCACCATGGGGCAATATCGACAATTGCTGGTGCTGCTGACCGAGGTCGATCCGCATTCCGCCGCTTTGCGCCGAGCCCTTGCCTTGGCGCAAGTCAGCGGCGCCAGCGTGCATGTGCTGGGCTTGTTc                                                                        <  1:399340/150‑1 (MQ=255)                                      gACGAAAGCGCGGAGGTTCACCATGGGGCAATATCGACAATTGCTGGTGCTGCTGACCGAGGTCGATCCGCATTCCGCCGCTTTGCGCCGAGCCCTTGCCTTGgc                                                                                                                <  1:18733/105‑1 (MQ=255)                                      gACGAAAGCGCGGAGGTTCACCATGGGGCAATATCGACAATTGCTGGTGCTGCTGACCGAGGTCGATCCGCATTCCGCCGCTTTGCGCCGAGCCCTTGCCTTGgc                                                                                                                >  2:18733/1‑105 (MQ=255)                                                        cACCATGGGGCAATATCGACAATTGCTGGTGCTGCTGACCGAGGTCGATCCGCATTCCGCCGCTTTGCGCCGAGCCCTTGCCTTGGCGCAAGTCAGCGGCGCCAGCGTGCATGTGCTGGGCTTGTTCGAGCCAAGCGAGGAGCACCTTCt                                                 >  2:169816/1‑150 (MQ=255)                                                         aCCATGGGGCAATATCGACAATTGCTGGTGCTGCTGACCGAGGTCGATCCGCATTCCGCCGCTTTGCGCCGAGCCCTTGCCTTGGCGCAAGTCAGCGGCGCCAGCGTGCATGTGCTGGGCTTGTTCGAGCCAAGCgagg                                                           >  1:386196/1‑139 (MQ=255)                                                         aCCATGGGGCAATATCGACAATTGCTGGTGCTGCTGACCGAGGTCGATCCGCATTCCGCCGCTTTGCGCCGAGCCCTTGCCTTGGCGCAAGTCAGCGGCGCCAGCGTGCATGTGCTGGGCTTGTTCGAGCCAAGCgagg                                                           <  2:386196/139‑1 (MQ=255)                                                                   aaTATCGACATTTGCTGGTGCTGCTGACCGAGGTCCATCCGCAGTCCGTCGCTTTGCGCCGAGCCCTTGCCTTCACGCAAGTCAGCGGCGCCAGCGTGCAGGTGCTGGGCTTGTTCGAGCCAAGCGAGGAGCACCTTCTGCGCGAAGAGc                                      <  1:29432/150‑1 (MQ=255)                                                                                    gTGCTGCTGAACGAGGTCGATCCGCATTCCGCCGCTTTGCGCCGAGCCCTTGCCTTGGCGCAAGTCAGCGGCGCCAGAGTGCATGTGATGGGCTTGTTCGAGCCAAGCGAGGAGGACCTTCTGCGCGAAGAGCGACTGAACGAGGCCGat                     >  2:137480/1‑150 (MQ=255)                                                                                                       aTCCGCATTCCGCCGCTTTGCGCCGAGCCCTTGCCTTGGCGCAAGTCAGCGGCGCCAGCGTGCATGTGCTGGGCTTGTTCGAGCCAAGCGAGGAGCACCTTCTGCGCGAAGAGCGGCTGAACGAGGCCGATATCAAGCGCCAGTACCAGc  >  1:378839/1‑150 (MQ=255)                                                                                                                 |                                                                                                                                            ATCCTGCGCGCGGAATATCGTCAGCATCACACCCACTGACGAAAGCGCGGAGGTTCACCATGGGGCAATATCGACAATTGCTGGTGCTGCTGACCGAGGTCGATCCGCATTCCGCCGCTTTGCGCCGAGCCCTTGCCTTGGCGCAAGTCAGCGGCGCCAGCGTGCATGTGCTGGGCTTGTTCGAGCCAAGCGAGGAGCACCTTCTGCGCGAAGAGCGGCTGAACGAGGCCGATATCAAGCGCCAGTACCAGC  >  NC_002947/3724415‑3724666

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.