New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5895316 | 24 (1.480) | 5 (0.330) | 5/242 | NT | 17.3% | coding (86/873 nt) | cysW | sulfate ABC transporter permease CysW |
? | NC_002947 | = 5895363 | 25 (1.630) | coding (39/873 nt) | cysW | sulfate ABC transporter permease CysW |
ACCACGGCGAGCAGGGTCAGCTTCAGCGCCGACAACGCATCGGGTTCGAATATCGCCTCGAAGAAGGTGCCAAAACCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGGGCGGCGTTGGCTGCGGCACTTGCACTCAGGGATGAACTGGACATGCCGGCCTCCTTCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATG > NC_002947/5895169‑5895464 | aCCACGGCGAGCAGGGTCAGCTTCAGCGCCGACAACGCATCGGGTTCGAATATCGCCTCGAAGAAGGTGCCAAAACCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAgg > 1:80708/1‑150 (MQ=255) aGCAGGGTCAGCTTCAGCGCCGACAACGCATCGGGTTCGAATATCGCCTCGAAGAAGGTGCCAAAACCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAGGCCGATCAgg > 2:44669/1‑150 (MQ=255) cgcCGACAACGCATCGGGTTCGAATATCGCCTCGAAGAAGGTGCCAAAACCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAGGCCGATCAGGATACGCCGTGACGTGgc < 2:166092/150‑1 (MQ=255) aaCGCATCGGGTTCGAATATCGCCTCGAAGAAGGTGCCAAAACCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCa > 2:30673/1‑150 (MQ=255) cATCGGGTTCGAATATCGCCTCGAAGAAGGTGCCAAAACCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGTCAGCCAAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCAcggc < 1:26498/150‑1 (MQ=255) ttCGAATATCGCCTCGAAGAAGGTGCCAAAACCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGggcggc < 1:44669/150‑1 (MQ=255) gAATATCGCCTCGAAGAAGGTGCCAAAACCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGGGCGGCGtt < 2:309684‑M2/150‑3 (MQ=255) gAATATCGCCTCGAAGAAGGTGCCAAAACCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGGGCGGCGtt < 2:265913‑M2/150‑3 (MQ=255) tCGCCTCGAAGAAGGTGCCAAAACCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGGGCGGCGttggctg > 2:80708‑M2/1‑143 (MQ=255) tCGCCTCGAAGAAGGTGCCAAAACCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAGGCCGATCAGGATACGCCGTGACGGGGCGCTGCCACGGCGGGCGGCGttggctg < 2:49678‑M2/150‑8 (MQ=255) ccTCGAAGAAGGTGCCAAAACCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGGGCGGCGTTGGCTGCgg > 1:168898/1‑150 (MQ=255) cTCGAAGAAGGTGCCAAAACCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAcgccgcccgccgtggcagcgccacgtcacggcgtatcctgatcggccttggctggctg < 1:412572‑M1/150‑59 (MQ=255) agaagGTGCCAAAACCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAcgccgcccgccgtggcagcgccacgtcacggcgtatcctgatcggcctt > 2:381245‑M1/1‑87 (MQ=255) agaagGTGCCAAAACCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAcgccgcccgccgtggcagcgccacgtcacggcgtatcctgatcggcctt < 1:381245‑M1/136‑50 (MQ=255) gTGCCAAAACCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGGGCGGCGTTGGCTGc > 2:345752/1‑137 (MQ=255) gTGCCAAAACCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGGGCGGCGTTGGCTGc < 1:345752/137‑1 (MQ=255) tGCCAAAACCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGGGCGGCGTTGGCTGCGGCACTTGCACTCa > 1:268616/1‑150 (MQ=255) gCCAAAACCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGGGCGGCGTTGGCTGCGGCACTTGCACTCAg < 1:170575/150‑1 (MQ=255) aaaaCCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAcgccgcccgccgtggcagcgccacgtcacggcgtatcctgatcggccttggctggctgg > 1:210964‑M1/1‑77 (MQ=255) aaaaCCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAcgccgcccgccgtggcagcgccacgtcacggcgtatcctgatcggccttggctggctgg < 2:210964‑M1/136‑60 (MQ=255) cGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGGGCGGCGTTGGCTGCGGCACTTGCACTCAGGGAt < 2:415904/146‑1 (MQ=255) cGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGGGCGGCGTTGGCTGCGGCACTTGCACTCAGGGAt > 1:415904/1‑146 (MQ=255) cGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGGGCGGCGTTGGCTGCGGCACTTGCACTCAGGGATGAAc > 1:342543/1‑150 (MQ=255) cttcAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGGGCGGCGTTGGCTGCGGCACTTGCACTCAGGGATGAACTGGa < 2:342543/150‑1 (MQ=255) cttcAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGGGCGGCGTTGGCTGCGGCACTTGCACTCAGGGATGAACTGGa < 2:268616/150‑1 (MQ=255) tGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGGGCGGCGTTGGCTGCGGCACTTGCACTCAGGGATGAACTGGACATGCCGGcc > 1:68368/1‑150 (MQ=255) aTACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGGGCGGCGTTGGCTGCGGCACTTGCACTCAGGGATGAACTGGACATGCCGGcctcct < 1:30673/150‑1 (MQ=255) ccACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGGGCGGCGTTGGCTGCGGCACTTGCACTCAGTGATGAACTGGACATGCCGGCCTCCTTCa > 2:112910/1‑150 (MQ=255) cACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGGGCGGCGTTGGCTGCGGCACTTGCACTCAGGGATGAACTGGACATGCCGGCCTCCTTCaa < 1:265913/150‑1 (MQ=255) cACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGGGCGGCGTTGGCTGCGGCACTTGCACTCAGGGATGAACTGGACATGCCGGCCTCCTTCaa < 1:266549/150‑1 (MQ=255) aCGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGGGCGGCGTTGGCTGCGGCACTTGCACTCAGGGATGAACTGGACATGCCGGCCTCCTTCAAg > 1:306902/1‑150 (MQ=255) agcgCGAACACCAGTCAGCCAAGGCCGATCAGGATACGCCGTTACGTGTCGCTGCCACGGCGGGAGGCGTTGGCTGCGGCACTTGCACTCAGGGATGAACTGGACATGCCGGCCTCCTTCGCCGGGTTTCGATGCGGCGCTGCAGCAGGt < 1:216617/147‑1 (MQ=255) gCGAACACCAGCCAGCCAAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGGGCGGCGTTGGCTGCGGCACTTGCACTCAGGGATGAACTGGACATGCCGGCCTCCTTCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGa > 1:40317/1‑150 (MQ=255) ccagccagCCAAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGGGCGGCGttggctggctggtgttcgccctgttcctgctgctgccgctggtgatcgtggtatcgcaggcgctgaagaacggtttt < 2:210964‑M2/136‑78 (MQ=255) ccagccagCCAAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGGGCGGCGttggctggctggtgttcgccctgttcctgctgctgccgctggtgatcgtggtatcgcaggcgctgaagaacggtttt > 1:210964‑M2/1‑59 (MQ=255) cagccagcCAAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGGGCGGCGttggctggctggtgttcgccctgttcctgctgctgccgctggtgatcgtggtatcgcaggcgctgaagaacggttttggcaccttcttcgag < 1:412572‑M2/150‑93 (MQ=255) cagccagcCAAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGGGCGGCGTTGGCTGCGGCACTTGCACTCAGGGATGAACTGGACATGCCGGCCTCCTTCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATcagcagc > 2:144391/1‑150 (MQ=255) cagccaAcgccgcccgccgtggcagcgccccgtcacggcgtatcctgatcggccttggctggctggtgttcgccctgttcctgctgctgccgctggtgatcgtggtatcgcaggcgctgaagaacggttttggcaccttcttcgaggcga < 2:49678‑M1/150‑144 (MQ=255) cagccaAcgccgcccgccgtggcagcgccacgtcacggcgtatcctgatcggccttggctggctggtgttcgccctgttcctgctgctgccgctggtgatcgtggtatcgcaggcgctgaagaacggttttggcaccttcttcgaggcga > 2:80708‑M1/1‑7 (MQ=255) caAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGGGCGGCGTTGGCTGCGGCACTTGCACTCAGGGATGAACTGGACATGCCGGCCTCCTTCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGAt > 1:154213/1‑150 (MQ=255) aacgccgcccgccgtggcagcgccacgtcacggcgtatcctgatcggccttggctggctggtgttcgccctgttcctgctgctgccgctggtgatcgtggtatcgcaggcgctgaagaacggttttggcaccttcttcgaggcgatattc < 2:309684‑M1/150‑149 (MQ=255) aacgccgcccgccgtggcagcgccacgtcacggcgtatcctgatcggccttggctggctggtgttcgccctgttcctgctgctgccgctggtgatcgtggtatcgcaggcgctgaagaacggttttggcaccttcttcgaggcgatattc < 2:265913‑M1/150‑149 (MQ=255) aaGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGGGCGGCGttggctggctggtgttcgccctgttcctgctgctgccgctggtgatcgtggtatcgcaggcgctgaagaacggttttggcaccttct < 1:381245‑M2/136‑88 (MQ=255) aaGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGGGCGGCGttggctggctggtgttcgccctgttcctgctgctgccgctggtgatcgtggtatcgcaggcgctgaagaacggttttggcaccttct > 2:381245‑M2/1‑49 (MQ=255) | ACCACGGCGAGCAGGGTCAGCTTCAGCGCCGACAACGCATCGGGTTCGAATATCGCCTCGAAGAAGGTGCCAAAACCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAAGGCCGATCAGGATACGCCGTGACGTGGCGCTGCCACGGCGGGCGGCGTTGGCTGCGGCACTTGCACTCAGGGATGAACTGGACATGCCGGCCTCCTTCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATG > NC_002947/5895169‑5895464 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |