New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5162643	16 (0.990)	4 (0.310)	4/204	NT	28.8%	intergenic (+118/+83)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
	?	NC_002947	= 5162675	7 (0.540)					intergenic (+150/+51)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase

GCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGT  >  NC_002947/5162526‑5162823                                                                                                                                                      |                                                                                                                                                     gCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTAc                                                                                                                                                      <  2:255207/150‑1 (MQ=255)   aaCACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTAc                                                                                                                                                      >  1:102951/1‑148 (MQ=255)   aaCACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTAc                                                                                                                                                      <  2:102951/148‑1 (MQ=255)                              gggAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACctgtgggagcgg                                                                                                                                          >  2:391003‑M2/1‑121 (MQ=255)                              gggAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACctgtgggagcgg                                                                                                                                          <  1:391003‑M2/133‑13 (MQ=255)                                                            gCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGTCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCACGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCtt                                                                                           >  2:266485/1‑150 (MQ=255)                                                            gCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAgg                                                                                                                         <  2:64782/120‑1 (MQ=255)                                                            gCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAgg                                                                                                                         >  1:64782/1‑120 (MQ=255)                                                                  ttttGTCTGTGTGAAATGCGCCGTCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGTGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAg                                                                                     <  1:133868/150‑1 (MQ=255)                                                                                                       ttGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACctgtg                                                                                                                                                 <  1:319107‑M2/53‑6 (MQ=255)                                                                                                       ttGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACctgtg                                                                                                                                                 >  2:319107‑M2/1‑48 (MQ=255)                                                                                                       ttGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAg                                                >  1:50048/1‑150 (MQ=255)                                                                                                       ttGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAg                                                <  2:50048/150‑1 (MQ=255)                                                                                                       ttGCCCACTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACctgtgggagcgggcaagcccgcgaaggggccggcgcatttcacacagacaaaaagaagcgggaaacgccggatggggtcggcgtttcc                                                              <  2:112808‑M2/136‑89 (MQ=255)                                                                                                       ttGCCCACTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACctgtgggagcgggcaagcccgcgaaggggccggcgcatttcacacagacaaaaagaagcgggaaacgccggatggggtcggcgtttcc                                                              >  1:112808‑M2/1‑48 (MQ=255)                                                                                                          cccGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGACAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTc                                             >  1:399557/1‑150 (MQ=255)                                                                                                                 ccACAGTATCACCACAGACCTTGAGAACTGTGCTGTACctgtgggagcgggcaagcccgcgaaggggccggcgcatttcacacagacaaaaagacgcgggaaacgccggatggggtcggcactgcccgcttcaggtgaagcagagcaggg                                      >  1:11733‑M2/1‑38 (MQ=255)                                                                                                                 ccACAGTATCACCACAGACCTTGAGAACTGTGCTGTACctgtgggagcgggcaagcccgcgaaggggccggcgcatttcacacagacaaaaaaccgaaaccaaagccggatggggtcggcgtttcccgcttcaggtgaagcagagcaggg                                      <  2:11733‑M2/150‑113 (MQ=255)                                                                                                                                              gtgCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTgg         <  2:118552/150‑1 (MQ=255)                                                                                                                                                gCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTa       >  2:161567/1‑150 (MQ=255)                                                                                                                                                     aCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGt  <  1:377020/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                     GCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGT  >  NC_002947/5162526‑5162823

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.