New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5823672 | 18 (1.110) | 3 (0.190) | 3/248 | NT | 15.6% | coding (552/1176 nt) | yggW | coproporphyrinogen/heterocyclic compound oxidase |
? | NC_002947 | = 5823707 | 15 (0.960) | coding (587/1176 nt) | yggW | coproporphyrinogen/heterocyclic compound oxidase |
GCATCCACAATGGCGACGAAGCGGTTCGAGCCGCCGGCATGGCGCGCGCGGCCGGTTTCGACAATTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCAGAGCTGCCCGAAGACGACATCCTCTGGGATATTCAGGAAGCCGGCCAAGCGCTGATGGCC > NC_002947/5823569‑5823843 | gcATCCACAATGGCGACGAAGCGGTTCGAGCCGCCGGCATGGCGCGCGCGGCCGGTTTCGACAACTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGc < 2:29852/150‑1 (MQ=255) tCCACAATGGCGACGAAGCGGTTCGAGCCGCCGGCATGGCGCGCGCGGCCGGTTTCGACAATTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGa < 2:21128/150‑1 (MQ=255) tGGCGACGAAGCGGGTCGAGCCGCCGGCATGGCGCGCGCGGCCGGTTTCGACAATTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCt < 2:75211/150‑1 (MQ=255) cgccgGCATGGCGCGCGCGGCCGGTTTCGACAATTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGt < 2:379040/150‑1 (MQ=255) gTTTCGACAATTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGa > 1:93233/1‑150 (MQ=255) ttCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCa < 1:106993/150‑1 (MQ=255) tCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCag > 1:302562/1‑150 (MQ=255) gCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACTTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCAGAGCTGCCCGAAgacga > 2:106768/1‑150 (MQ=255) cACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCAGAGCTGCCCGAAgacgac < 1:75944/150‑1 (MQ=255) cACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCAGAGCTGCCCGAAgacgac < 2:302562/150‑1 (MQ=255) tGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCAGAGCTGCCCGAAGACGACATCctct < 1:442940/150‑1 (MQ=255) cccGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCAGAGCTGCCCGAAGACGACATCCTCTgg > 1:287936/1‑150 (MQ=255) gACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATcgactggtcgggcaggccgtgcatcaggtccatgttgaaattgtcgaaaccggccgcgcgcgccatgccggcggctcgaaccgcttcgtcgccattgtggatgcgc < 2:20504‑M2/150‑107 (MQ=255) gCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATcgactggtcgggcaggccgtgcatcaggtccatgttgaaattgtcgaaaccggccgcgcgcgccatgccggcgg < 1:390042‑M2/110‑75 (MQ=255) gCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATcgactggtcgggcaggccgtgcatcaggtccatgttgaaattgtcgaaaccggccgcgcgcgccatgccggcgg > 2:390042‑M2/1‑36 (MQ=255) gACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCAGAGCTGCCCGAAGACGACATCCTCTGGGATATTCAGGAAGCCGGCCAAGCGCTGATg < 1:336782/150‑1 (MQ=255) aCCTGCGCCAGGCCATCGACCTGGGGCCGACCCACTTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCAGAGCTGCCCGAAGACGACATCCTCTGGGATATTCAGGAAGCCGGCCAAGCGCTGATgg < 1:106768/150‑1 (MQ=255) cTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCAGAGCTGCCCGAAGACGACATCCTCTGGGATATTCAGGAAGCCGGCCAAGCACTGATGGcc > 1:119981/1‑150 (MQ=255) | GCATCCACAATGGCGACGAAGCGGTTCGAGCCGCCGGCATGGCGCGCGCGGCCGGTTTCGACAATTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCAGAGCTGCCCGAAGACGACATCCTCTGGGATATTCAGGAAGCCGGCCAAGCGCTGATGGCC > NC_002947/5823569‑5823843 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |