New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1746298	8 (0.410)	3 (0.160)	3/248	NT	23.4%	coding (210/387 nt)	PP_1544	hypothetical protein
	?	NC_002947	= 1746325	12 (0.650)					coding (183/387 nt)	PP_1544	hypothetical protein

CTGGGTCTCGCTTAAGCTCTGCCATGCTGGCCGCTTCGAACTCACGCGCTAGTTTTGGCGATATGTAAAAAGCTGGCGCGTCAGGTCGTTCAAGGCGACGCGCCCGCTCTTCAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1746183‑1746298 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggaCCTGGCGCTGTCATGGATCGCGCAGGATCCTGAA  <  NC_002947/1746325‑1746292                                                                                                                                                        CTGGGTCTCGCTTAAGCTCTGCCATGCTGGCCGCTTCGAACTCACGCGCTAGTTTTGGCGATATGTAAAAAGCTGGCGCGTCAGGTCGTTCAAGGCGACGCGCCCGCTCTTCAGGACCTGGCGCTGTCATGGATCGCGCAGGATCCTGAA  <  1:442311/150‑1                                   TTCGAACTCACGCGCTAGTTTTGGCGATATGTAAAAAGCTGGCGCGTCAGGTCGTTCAAGGCGACGCGCCCGCTCTTCAGGACCTGGCGCTGTCATGGATCGCGCAGGATCC      <  1:384796/112‑1                                   TTCGAACTCACGCGCTAGTTTTGGCGATATGTAAAAAGCTGGCGCGTCAGGTCGTTCAAGGCGACGCGCCCGCTCTTCAGGACCTGGCGCTGTCATGGATCGCGCAGGATCC      >  2:384796/1‑112                                                                                                                                                        CTGGGTCTCGCTTAAGCTCTGCCATGCTGGCCGCTTCGAACTCACGCGCTAGTTTTGGCGATATGTAAAAAGCTGGCGCGTCAGGTCGTTCAAGGCGACGCGCCCGCTCTTCAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1746183‑1746298 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggaCCTGGCGCTGTCATGGATCGCGCAGGATCCTGAA  <  NC_002947/1746325‑1746292

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.