New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2112769 = | 16 (0.830) | 4 (0.220) | 4/246 | NT | 20.4% | coding (1560/4899 nt) | PP_1882 | membrane protein |
? | NC_002947 | 2112789 = | 16 (0.870) | coding (1540/4899 nt) | PP_1882 | membrane protein |
CCCGGCGAGCAGCGGCCGGGGGCAAGCCCCTGTTCTCACTCAGCACTACCGCTACAAGGCGCTGGCGCCACTGGCAGGCAACGCCATCACCCTCAACCCGATGATTGTCGAGCACAGTGAAACCCTGACGCATGCGCACGATCCGGCGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2112919‑2112769 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcatGCGTCAGGGTTTCACTGTGCTCGACAATCATCGGGTTGAGGGTGATGGCGTTGCCTGCCAGTGGCGCCAGCGCCTTGTAGCGGTAGTGCTGAGTGAGAACAGGGGCTTGCCCCCGGCCGCTGCTCGCCGGGGTGGTGGTTTTGCTC > NC_002947/2112789‑2112934 CCCGGCGAGCAGCGGCCGGGGGCAAGCCCCTGTTCTCACTCAGCACTACCGCTACAAGGCGCTGGCGCCACTGGCAGGCAACGCCATCACCCTCAACCCGATGATTGTCGAGCACAGTGAAACCCTGACGCATGCGCACGATCCGGCGCA > 1:387345/1‑150 GCCACTGGCAGGCAACGCCATCACCCTCAACCCGATGATTGTCGAGCACAGTGAAACCCTGACGCATGCGCCGGATCGTGCGCATGCGTCAGG > 1:386946/1‑93 GCCACTGGCAGGCAACGCCATCACCCTCAACCCGATGATTGTCGAGCACAGTGAAACCCTGACGCATGCGCCGGATCGTGCGCATGCGTCAGG < 2:386946/93‑1 AACGCCATCACCCTCAACCCGATGATTGTCGAGCACAGTGAAACCCTGACGCATGCGCCGGATCGTGCGCATGCGTCAG > 1:205950/1‑79 AACGCCATCACCCTCAACCCGATGATTGTCGAGCACAGTGAAACCCTGACGCATGCGCCGGATCGTGCGCATGCGTCAG < 2:205950/79‑1 GCGCATGCGTCAGGGTTTCACTGTGCTCGACAATCATCGGGTTGAGGGTGATGGCGTTGCCTGCCAGTGGCGCCAGCGCCTTGTAGCGGTAGTGCTGAGTGAGAACAGGGGCTTGCCCCCGGCCGCTGCTCGCCGGGGTGGTGGTctcat < 2:223792/150‑6 GCATGCGTCAGGGTTTCACTGTGCTCGACAATCATCGGGTTGAGGGTGATGGGAATGGCTGCCAGTGGCGCCAGCGCCTTGTAGCGGTAGTGCTGAGTGAGAACAGGGGCTTGCCCCCGGCCGCTGCTCGCCGGGGTGGTGGTTTTGCTC > 2:489070/1‑150 CCCGGCGAGCAGCGGCCGGGGGCAAGCCCCTGTTCTCACTCAGCACTACCGCTACAAGGCGCTGGCGCCACTGGCAGGCAACGCCATCACCCTCAACCCGATGATTGTCGAGCACAGTGAAACCCTGACGCATGCGCACGATCCGGCGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2112919‑2112769 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcatGCGTCAGGGTTTCACTGTGCTCGACAATCATCGGGTTGAGGGTGATGGCGTTGCCTGCCAGTGGCGCCAGCGCCTTGTAGCGGTAGTGCTGAGTGAGAACAGGGGCTTGCCCCCGGCCGCTGCTCGCCGGGGTGGTGGTTTTGCTC > NC_002947/2112789‑2112934 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |