| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2310567 = | 10 (0.520) | 3 (0.170) | 3/238 | NT | 22.0% | coding (275/1311 nt) | PP_2033 | hypothetical protein |
| ? | NC_002947 | 2310624 = | 12 (0.670) | coding (332/1311 nt) | PP_2033 | hypothetical protein | |||||
CCGCGCCGCGGCTGAAACCGAAAAGATCGAACTCGACCCCTTCCAGCGTCGCCTGCGGATGCGCCTGGCGCCATGCCCGCAGTTGCTCGGCCATTCCCTGCAACGCCTCGGCAACCCGGGCCTCTGCCCCTGTGCGCCCATGCCCGGTGGCCGAGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2310725‑2310567‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgaggcgtTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCATCCGCAGGCGACGCTGGAAGGGGTCGAGTTCGATCTTTTCGGTTTCAGCCGCGGCGCGGCAGCGGTGCGGCATCTGGCCAACCTGCTGCACGATGGCGCGGGCGGG > NC_002947/2310624‑2310772 CCGCGCCGCGGCTGAAACCGAAAAGATCGAACTCGACCCCTTCCAGCGTCGCCTGCGGATGCGCCTGGCGCCATGCCCGCAGTTGCTCGGCCATTCCCTGCAACGCCTCGGCAACCCGGGCCTCTGCCCCTGTGCGCCCATGCCCGGTGG < 2:457171/150‑1 CGCGCCGCGGCTGAAACCGAAAAGATCGAACTCGACCCCTTCCAGCGTCGCCTGCGGATGCGCCTGGCGCCATGCCCGCAGTTGCTCGGCCATTCCCTGCAACGCCTCGGCAACCCGGGCCTCTGCCCCTGTGCGCCCATGCCCGGTGGC < 2:112576/150‑1 GCCGCGGCTGAAACCGAAAAGATCGAACTCGACCCCTTCCAGCGTCGCCTGCGGATGCGCCTGGCGCCATGCCCGCAGTTGCTCGGCCATTCCCTGCAACGCCTCGGCAACCCGGGCCTCTGCCCCTGTGCGCCCATGCCCGGTGGCCGA < 2:192137/150‑1 ACGCCTCGGCAACCCGGGCCTCTGCCCCTGTGCGCCCATGCCCGGTGGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCATCCGCAGGCGACGCTGGAAGGGGTCGAGTTCGATCTTTTCGGTTTCAGCC > 2:144294/1‑150 CCTCGGCAACCCGGGCCTCTGCCCCTGTGCGCCCATGCCCGGTGGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCATCCGCAGGCGACGCTGGAAGGGGTCGAGTTCGATCTTTTC > 1:311717/1‑137 CCTCGGCAACCCGGGCCTCTGCCCCTGTGCGCCCATGCCCGGTGGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCATCCGCAGGCGACGCTGGAAGGGGTCGAGTTCGATCTTTTC < 2:311717/137‑1 GAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCATCCGCAGGCGACGCTAGAAGGGGTCGAGTTCGATCTTTTCGTTTTCAGCCGCGGCTCGGCAGCGGTGCGGCATCTGGCCAACCTGCTGCACGATGGCGCG > 2:354382/1‑150 TTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCATCCGCAGGCGACGCTGGAAGGGGTCGAGTTCGATCTTTTCGGTTTCAGCCGCGGCGCGGCAGCGGTGCGGCATCTGGCCAACCTGCTGCACGATGGCGCGGGCGGG < 1:9945/150‑1 CCGCGCCGCGGCTGAAACCGAAAAGATCGAACTCGACCCCTTCCAGCGTCGCCTGCGGATGCGCCTGGCGCCATGCCCGCAGTTGCTCGGCCATTCCCTGCAACGCCTCGGCAACCCGGGCCTCTGCCCCTGTGCGCCCATGCCCGGTGGCCGAGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2310725‑2310567‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgaggcgtTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCATCCGCAGGCGACGCTGGAAGGGGTCGAGTTCGATCTTTTCGGTTTCAGCCGCGGCGCGGCAGCGGTGCGGCATCTGGCCAACCTGCTGCACGATGGCGCGGGCGGG > NC_002947/2310624‑2310772 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |