New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3387807 = | 10 (0.520) | 3 (0.170) | 3/242 | NT | 23.6% | coding (545/795 nt) | PP_2989 | short‑chain dehydrogenase/reductase family oxidoreductase |
? | NC_002947 | 3387849 = | 10 (0.550) | coding (587/795 nt) | PP_2989 | short‑chain dehydrogenase/reductase family oxidoreductase |
CTCGGCAACATGAAGTGGCGGGATGGTTACCAACTCGCGACGGTCGAAACCGACAAGTGCAGCATCGACCAGCTCACCGACCTCCATCACCTCCGGGAGTGTGTTGACGTCAATGCCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3387961‑3387807 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggcaTTGACGTCAACACACTCCCGGAGGTGATGGAGGTCGGTGAGCTGGTCGATGCTGCACTTGTCGGTTTCGACCGTCGCGAGTTGGTAACCATCCCGCCACTTCATGT > NC_002947/3387849‑3387954 CTCGGCAACATGAAGTGGCGGGATGGTTACCAACTCGCGACGGTCGAAACCGACAAGTGCAGCATCGACCAGCTCACCGACCTCCATCACCTCCGGGAGTGTGTTGACGTCAATGCCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGC < 1:428499/150‑1 CAACATGAAGTGGCGGGATGGTTACCAACTCGCGACGGTCGAAACCGACAAGTGCAGCATCGACCAGCTCACCGACCTCCATCACCTCCGGGAGTGTGTTGACGTCAATGCCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCA < 1:417418/150‑1 TCGCGACGGTCGAAACCGACAAGTGCAGCATCGACCAGCTCACCGACCTCCATCACCTCCGGGAGTGTGTTGACGTCAATGCCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGG < 1:430895/119‑1 TCGCGACGGTCGAAACCGACAAGTGCAGCATCGACCAGCTCACCGACCTCCATCACCTCCGGGAGTGTGTTGACGTCAATGCCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGG > 2:430895/1‑119 AATGCCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGTCATTGACGTCAAAACACTCCCGGAGGTGATGGAGGTCGGTGAGCTGGTCGATGCTGCACTGGTCCGTTTCGACCGTCGCGAGTTGGTAACCATCCCGCCACTTCATGT > 2:60943/1‑150 TGCCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCATTGACGTCAACACACTCCCGGAGGTGATGGAGGTCGGTGA < 1:349435/82‑1 TGCCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCATTGACGTCAACACACTCCCGGAGGTGATGGAGGTCGGTGA > 2:349435/1‑82 CTCGGCAACATGAAGTGGCGGGATGGTTACCAACTCGCGACGGTCGAAACCGACAAGTGCAGCATCGACCAGCTCACCGACCTCCATCACCTCCGGGAGTGTGTTGACGTCAATGCCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3387961‑3387807 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggcaTTGACGTCAACACACTCCCGGAGGTGATGGAGGTCGGTGAGCTGGTCGATGCTGCACTTGTCGGTTTCGACCGTCGCGAGTTGGTAACCATCCCGCCACTTCATGT > NC_002947/3387849‑3387954 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |