| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2794965 | 15 (0.780) | 6 (0.350) | 6/232 | NT | 28.9% | intergenic (+30/+82) | PP_2447/puuB | hypothetical protein/gamma‑glutamylputrescine oxidase |
| ? | NC_002947 | = 2795016 | 16 (0.920) | intergenic (+81/+31) | PP_2447/puuB | hypothetical protein/gamma‑glutamylputrescine oxidase | |||||
ACCGCGGCAACTGCCGGCCCAGGTTGATCGCCAGCGGTGGTTGCATGCTGCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGC > NC_002947/2794818‑2795113 | aCCGCGGCAACTGCCGGCCCAGGTTGATCGCCAGCGGTGGTTGCATGCTGCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGGCGTCATGTTGGCCGGCAAac > 2:473706‑M1/1‑148 (MQ=255) gCCGGCCCAGGTTGATCGCCAGCGGTGGTTGCATGCTGCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAg > 2:269366/1‑150 (MQ=255) gTTGATCGCCAGCGGTGGTTGCATGCTGCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGCGACTATGCTGAACGAATAGCGTTGCCTGTGCAGGCCTATTCGCCGGCAAacctgcgcccacacggactgtgca > 1:208894‑M1/1‑126 (MQ=255) ggtTGCATGCTGCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAgcctgcgcccacacggactgggtaataagcacaaatcctg < 2:43813‑M1/150‑41 (MQ=255) tGCATGCTGGGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTgg < 2:138827/150‑1 (MQ=255) ggATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAacctgcgcccacacggactgtgcaataagcacaaatcctgtgggcgcgggctt < 1:473706‑M1/150‑54 (MQ=255) aTGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAacctgcgcccacacggactgtgcaataagcacaaatcctgtgggcgcgggcttgc < 1:260905‑M1/150‑56 (MQ=255) tGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCCTCTTCGCCGGCAAacctgcgcccacacggactgtgcaataagcacaaatcctgtgggcgcgggcttgcc < 2:208894‑M1/150‑57 (MQ=255) ttGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTttgccggcg < 2:451161‑M2/150‑10 (MQ=255) ggCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAacctgcgcccacacggactgtgcaataagcacaaatcctgtgggcgcgggcttgccggcgaa < 2:346102‑M1/150‑63 (MQ=255) ttGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAg > 1:350113/1‑117 (MQ=255) ttGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAg < 2:350113/117‑1 (MQ=255) ttGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGaggc > 1:117306/1‑135 (MQ=255) ttGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGaggc < 2:117306/135‑1 (MQ=255) gcggcgAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCa < 1:451161/150‑1 (MQ=255) ggcgAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTtt < 1:477111‑M2/117‑3 (MQ=255) ggcgAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTtt > 2:477111‑M2/1‑115 (MQ=255) aaCGAAGATCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTTGGCGCAGGTTTGCGGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTgta < 1:197807/150‑1 (MQ=255) aGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGaggccaggcc < 1:96998/105‑1 (MQ=255) aGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGaggccaggcc > 2:96998/1‑105 (MQ=255) gCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCg > 2:149813/1‑150 (MQ=255) tgCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGgc < 1:269366/150‑1 (MQ=255) gCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGa > 2:330761/1‑150 (MQ=255) cttcttCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGaa < 2:208/150‑1 (MQ=255) ttcttcGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAg < 1:263092/150‑1 (MQ=255) ttcGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTttgccggcgaagaagccggcacaggcaacgctattcgttcaggctattgaccgcctgcttcgccgcaatctcttgcccggccttggcc < 2:346102‑M2/150‑89 (MQ=255) cGCCGGCAAacctgcgcccacacggactgtgcaataagcacaaatcctgtgggcgcgggcttgccggcgaagaagccggcacaggcaacgctattcgttcaggctattgaccgcctgcttcgccgcaatctcttgcccggccttggccaa < 2:451161‑M1/150‑142 (MQ=255) ggCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTttgccggcgaagaggccggcacaggcaacgctattcgttcaggctattgaccgcctgcttcgccgcaatctcttgcccggccttggccaattca < 2:208894‑M2/150‑95 (MQ=255) gCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTttgccggcgaagaagccggcacaggcaacgctattcgttcaggctattgaccgcctgcttcgccgcaatctcttgcccggccttggccaattcat < 1:260905‑M2/150‑96 (MQ=255) gCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCgca > 1:294838/1‑150 (MQ=255) aaacctgcgcccacacggactgtgcaataagcacaaatcctgtgggcgcgggcttgccggcgaagaagccggcacaggcaacgctattcgttcaggctattgaccgcctgcttcgcc < 1:477111‑M1/117‑116 (MQ=255) aaacctgcgcccacacggactgtgcaataagcacaaatcctgtgggcgcgggcttgccggcgaagaagccggcacaggcaacgctattcgttcaggctattgaccgcctgcttcgcc > 2:477111‑M1/1‑2 (MQ=255) aaGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTttgccggcgaagaagccggcacaggcaacgctattcgttcaggctattgaccgcctgcttcgccgcaatctcttgcccggccttggccaattcatcc < 1:473706‑M2/150‑98 (MQ=255) | ACCGCGGCAACTGCCGGCCCAGGTTGATCGCCAGCGGTGGTTGCATGCTGCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGC > NC_002947/2794818‑2795113 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |