New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5692618 | 20 (1.030) | 8 (0.450) | 5/236 | NT | 27.0% | intergenic (+31/‑139) | PP_4994/PP_4995 | hypothetical protein/exopolysaccharide biosynthesis protein |
? | NC_002947 | = 5692680 | 25 (1.420) | intergenic (+93/‑77) | PP_4994/PP_4995 | hypothetical protein/exopolysaccharide biosynthesis protein |
GATCATCCGCACCTGGCGCTTTGCCCGTGGGGACCGTTTGTCCAGTAACTGATTTTCTGCATGTGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACGGGTTGCTCACCGGCGCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTTCCTGATCGCCATGCCGCACATGGCCGATCC > NC_002947/5692536‑5692824 | ggtcaaccgGACCTAACGCATTGCCGGGGGAGACCGTTTGTCCAGTAACTGATTTTCTGCATGTGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACGGGTTGCTCACCGGCGCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCAtgccc > 2:473611‑M2/3‑145 (MQ=255) ccGCACCTGGCGCTTTGCCCGTGGGGACCGTTTGTCCAGTAACTGATTTTCTGCATGTGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACGGGTTGCTCACCGGCGCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCAtgcccgcgaag > 1:409080‑M2/1‑139 (MQ=255) cTGGCGCTTTGCCCGTGGGGACCGTTTGTCCAGTAACTGATTTTCTGCATGTGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACGGGTTGCTCACCGGCGCTGACGCCTGTGGAGTATCGGCGGGAGCGGGCCTGCCCGCGAAGGGGGTg > 2:395146/1‑150 (MQ=255) cTGGCGCTTTGCCCGTGGGGACCGTTTGTCCAGTAACTGATTTTCTGCATGTGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACGGGTTGCTCACCGGCGCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCATGCCCGCGAAGGGGCTg < 2:46676/150‑1 (MQ=255) cTGGCGCTTTGCCCGTGGGGACCGTTTGTCCAGTAACTGATTTTCTGCATGTGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACGGGTTGCTCACCGGCGCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCATGCCCGCGAAGGGGCTg < 1:112595/150‑1 (MQ=255) ccGTGGGGACCGTTTGTCCAGTAACTGATTTTCTGCATGTGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACGGGTTGCTCACCGGCGCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGaca > 1:14332/1‑150 (MQ=255) ggggACCGTTTGTCCAGTAACTGATTTTCTGCATGTGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACGGGTTGCTCACCGGCGCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGACACaaa < 1:35385/150‑1 (MQ=255) gggACCGTTTGTCCAGTAACTGATTTTCTGCATGTGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACGGGTTGCTCACCGGCGCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGACACAAAg < 1:222156/150‑1 (MQ=255) ttttCTGCATGTGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACGGGTTGCTCACCGGCGCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCAcc > 1:292460/1‑150 (MQ=255) ccGGCCTCTTCGCGGGCACGCCCGCTCCCACGGGTTGCTCACCGGCGCGGAAGCCTGTGGAGTATCGGCGGGAGCCGGCATGCCCGGGAAGGGGCTGGCAAAAGCGAAACAAAGCCCACCTTGTCGGTCTCGCCACCTGGCGCCACACtc > 2:230491/1‑149 (MQ=255) tgcgcgGGCCCGCCCGCTCCCACGGGTTGCTCACCGGCGTTGAAGCCTGTGGAGTAGCGGCGGGAGCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCAt < 1:395146/148‑1 (MQ=255) gCACGCCCGCTCCCACGGGTTGCTCACCGGCGCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCAtgcccgcgaaggggctggcacatgcagaaaatcagttactggacaaac > 1:195219‑M2/1‑65 (MQ=255) gCACGCCCGCTCCCACGGGTTGCTCACCGGCGCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCAtgcccgcgaaggggctggcacatgcagaaaatcagttactggacaaac < 2:195219‑M2/113‑49 (MQ=255) cACGCCCGCTCCCACGGGTTGCTCACCGGCGCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCAtgcccgcgaaggggctggcacatgcagaaaatcagttactggacaaacggtccccacgggcaaagcgccaggtgcggatgatctcc < 1:321886‑M2/150‑87 (MQ=255) aCGCCCGCTCCCACGGGTTGCTCACCGGCGCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCAtgcccgcgaagaggccggcacatgcagaaaatcagttactggacaaacggtccccacgggcaaagcgccaggtgcggatgatctcca < 1:67978‑M2/150‑88 (MQ=255) aCGCCCGCTCCCACGGGTTGCTCACCGGCGCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCt < 2:345240/150‑1 (MQ=255) cGCCCGCTCCCACGGGTTGCTCACCGGCGCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTc < 2:14332/150‑1 (MQ=255) gCCCGCTCCCACGGGTTGCTCACCGGCGCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGa < 1:208054/88‑1 (MQ=255) gCCCGCTCCCACGGGTTGCTCACCGGCGCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGa > 2:208054/1‑88 (MQ=255) gCCCGCTCCCACGGGTTGCTCACCGGCGCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCg > 1:295489/1‑150 (MQ=255) ccGCTCTCACGGGTTGCTCACCGGCGCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCAtgcccgcgaagaggccggcacatgcagaaaatcagttactggacaaacggtccccacgggcaaagcgccaggtgcggatgat > 2:343844‑M2/1‑59 (MQ=255) ccGCTCCCACGGGTTGCTCACCGGCGCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCAtgcccgcgaagaggccggcacatgcagaaaatcagttactggacaaacggtccccacgggcaaagcgccaggtgcggatgat < 1:343844‑M2/141‑83 (MQ=255) cTCCCACGGGTTGCTCACCGGCGCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCAtgcccgcgaagaggccggcacatgcagaaaatcagttactggacaaacggtccccacgggcaaagcgccaggtgcggatgatctccagccggtc > 2:67978‑M2/1‑56 (MQ=255) ccACGGGTTGCTCACCGGCGCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGAcaca < 2:90622/84‑1 (MQ=255) ccACGGGTTGCTCACCGGCGCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGAcaca > 1:90622/1‑84 (MQ=255) aCGGGTTGCTCACCGGCGCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTa > 2:410075/1‑150 (MQ=255) cGGGTTGCTCACCGGCGCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCGtgcccgcgaagaggccggcacatgcagaaaatcagttactggacaaacggtccccacgggcaaagcgccaggtgcggatgatctccagccggtcgaactc < 2:397945‑M2/150‑101 (MQ=255) aCCGGCGCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGACACAAAGCCCACCt < 1:89875/81‑1 (MQ=255) aCCGGCGCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGACACAAAGCCCACCt > 2:89875/1‑81 (MQ=255) aGCCTGTGGAGTATCGGCGGGAGCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAAGCCTCGCACCCAGCTACCTCAAGCACCAGTTCCTGATc < 1:398780/150‑1 (MQ=255) tgGAGTATCGGCGGGAGCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCg < 2:332119/112‑1 (MQ=255) tgGAGTATCGGCGGGAGCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCg > 1:332119/1‑112 (MQ=255) ggAGTATCGGCGGGAGCGGGCATGCCCGCGAAGGGGCTgg < 2:411734/40‑1 (MQ=255) ggAGTATCGGCGGGAGCGGGCATGCCCGCGAAGGGGCTgg > 1:411734/1‑40 (MQ=255) cGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTTCCTGATCGCCATGCCGCACATGGCCGATcc < 2:292460/150‑1 (MQ=255) | GATCATCCGCACCTGGCGCTTTGCCCGTGGGGACCGTTTGTCCAGTAACTGATTTTCTGCATGTGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACGGGTTGCTCACCGGCGCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTTCCTGATCGCCATGCCGCACATGGCCGATCC > NC_002947/5692536‑5692824 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |