New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1862281 = | 15 (0.680) | 3 (0.140) | 3/248 | NT | 16.9% | intergenic (‑245/‑76) | purM/PP_1666 | phosphoribosylformylglycinamidine cyclo‑ligase/hypothetical protein |
? | NC_002947 | 1862302 = | 15 (0.700) | intergenic (‑266/‑55) | purM/PP_1666 | phosphoribosylformylglycinamidine cyclo‑ligase/hypothetical protein |
GGCAGTGGCCGAGATCAGGGCCAGGCAACCGGCTGCCAGAATATTGAACAAACGCATGGAGGATTCCTGTCCAGTCGAGCTTCAAGCCGTAAGCTTCAAGCTGCAAGAAAAAGCAGGCCGAGCGC‑CGGGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1862413‑1862281 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcTTTTTCTTGCAGCTTGA > NC_002947/1862302‑1862318 GGCAGTGGCCGAGATCAGGGCCAGGCAACCGGCTGCCAGAATATTGAACAAACGCATGGAGGATTCCTGTCCAGTCGAGCTTCAAGCCGTAAGCTTCAAGCTGCAAGAAAAAGCAGCCCG‑GCGCTCGGCCTGCTTTTTCTTGCAGCTTGA < 2:350497/150‑1 AAACGCATGGAGGATTCCTGTCCAGTCGAGCTTCAAGCCGTAAGCTTCAAGCTGCAAGAAAAAGCAGCCCG‑GCGCTCGGCCTGCTTTTTC > 1:218625/1‑90 AAACGCATGGAGGATTCCTGTCCAGTCGAGCTTCAAGCCGTAAGCTTCAAGCTGCAAGAAAAAGCAGCCCG‑GCGCTCGGCCTGCTTTTTC < 2:218625/90‑1 GGCAGTGGCCGAGATCAGGGCCAGGCAACCGGCTGCCAGAATATTGAACAAACGCATGGAGGATTCCTGTCCAGTCGAGCTTCAAGCCGTAAGCTTCAAGCTGCAAGAAAAAGCAGGCCGAGCGC‑CGGGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1862413‑1862281 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcTTTTTCTTGCAGCTTGA > NC_002947/1862302‑1862318 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |