New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4094693 | 12 (0.540) | 7 (0.350) | 7/232 | NT | 39.0% | intergenic (+65/+70) | PP_3602/PP_3603 | 2,5‑dioxovalerate dehydrogenase/GntR family transcriptional regulator |
? | NC_002947 | = 4094738 | 11 (0.550) | intergenic (+110/+25) | PP_3602/PP_3603 | 2,5‑dioxovalerate dehydrogenase/GntR family transcriptional regulator |
CCGCAGACGCTGCTGCCTGAGGCACTGCGCGACGGCAACCCGCTGGGGCTGCGGCGGTTGGTGAACGGTCAGTGGAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4094536‑4094693 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtactggcctCTTCGCGGGCAAGATAGCCCTGTCGAAGCGGGCTTGCCCGCGAAAAGGCCAGTACAGTCAAAAAAGAAAAGCCCCGCCGTGCGCAGGGCTTTCCTGTTTCTGGCAACCAGTCAGATCGCCCCGTCACTCCACTGACCGTTCACCAACCG < NC_002947/4094738‑4094590 CCGCAGACGCTGCTGCCTGAGGCACTGCGCGACGGCAACCCGCTGGGGCTGCGGCGGTTGGTGAACGGTCAGTGGAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGT > 2:562695/1‑150 AACCCGCTGGGGCTGCGGCGGTTGGTGAACGGTCAGTGGAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTACCGGGCAAGATAGCCCTGTCGAcg > 2:277029/1‑148 TGCGGCGGTTGGTGAACGGTCAGTGGAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGATAGCCCTGTCGAAGCGGGCTTGCCCGC < 1:277029/150‑1 CGGTTGGTGAACGGTCAGTGGAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTCTTCGCGGGCAAGATAGCCCTGTCGAAGCGGGCTTGCCCGCGAAAA < 1:527859/150‑1 ACGGTCAGTGGAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGG > 1:295107/1‑91 ACGGTCAGTGGAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGG < 2:295107/91‑1 GAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTCTTCGCGGGCAAGATAGCCCTGTCGAAGCGGGCTTGCCCGCGAAAAG > 1:332056/1‑102 GAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTCTTCGCGGGCAAGATAGCCCTGTCGAAGCGGGCTTGCCCGCGAAAAG < 2:332056/102‑1 AAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTCTTCGCGGGCAAGATAGCCCTGTCGAAGCGGGCTTGCCCGCGAAAAGGCCA < 1:13036/105‑1 AAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTCTTCGCGGGCAAGATAGCCCTGTCGAAGCGGGCTTGCCCGCGAAAAGGCCA > 2:13036/1‑105 CTGTACTGGCCTCTTCGCGGGCAAGATAGCCCTGTCGAAGCGGGCTTGCCCGCGAAAAGGCCAGTACAGTCAAAAAAGAAAAGCCCCGCCGTGCGCAGGGCTTTCCTGTTTCTGGCAACCAGTCAGATCGCCCCGTCACTCCACTGACCG > 2:186972/1‑150 GCCTCTTCGCGGGCAAGATAGCCCTGTCGAAGCGGGCTTGCCCGCGAAAAGGCCAGTACTGTCAAAAAAGAAAAGCCCCGCCGTGCGCAGGGCTTTCCTGTTTCTGGCAACCAGTCAGATCGCCCCGTCACTCCACTGACCGTTCACCAA > 2:436743/1‑150 CTCTTCGCGGGCAAGATAGCCCTGTCGAAGCGGGCTTGCCCGCGAAAAGGCCAGTACAGTCAAAAAAGAAAAGCCCCGCCGTGCGCAGGGCTTTCCTGTTTCTGGCAACCAGTCAGATCGCCCCGTCACTCCACTGACCGTTCACCAACC > 2:435430/1‑150 TCTTCGCGGGCAAGATAGCCCTGTCGAAGCGGGCTTGCCCGCGAAAAGGCCAGTACAGTCAAAAAAGAAAAGCCCCGCCGTGCGCAGGGCTTTCCTGTTTCTGGCAACCAGTCAGATCGCCCCGTCACTCCACTGACCGTTCACCAACCG > 1:345883/1‑150 TCTTCGCGGGCAAGATAGCCCTGTCGAAGCGGGCTTGCCCGCGAAAAGGCCAGTACAGTCAAAAAAGAA < 1:41518/69‑1 TCTTCGCGGGCAAGATAGCCCTGTCGAAGCGGGCTTGCCCGCGAAAAGGCCAGTACAGTCAAAAAAGAA > 2:41518/1‑69 CCGCAGACGCTGCTGCCTGAGGCACTGCGCGACGGCAACCCGCTGGGGCTGCGGCGGTTGGTGAACGGTCAGTGGAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4094536‑4094693 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtactggcctCTTCGCGGGCAAGATAGCCCTGTCGAAGCGGGCTTGCCCGCGAAAAGGCCAGTACAGTCAAAAAAGAAAAGCCCCGCCGTGCGCAGGGCTTTCCTGTTTCTGGCAACCAGTCAGATCGCCCCGTCACTCCACTGACCGTTCACCAACCG < NC_002947/4094738‑4094590 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |