New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5333257 | 25 (1.130) | 3 (0.150) | 3/226 | NT | 10.7% | intergenic (+41/‑202) | gluQ/PP_5704 | glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein |
? | NC_002947 | = 5333287 | 28 (1.440) | intergenic (+71/‑172) | gluQ/PP_5704 | glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein |
ACAGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5333100‑5333257 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacaggTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGTAAAGGTTCAGCGCAAATCAGCCTCTGGCACCGTGGTCCGCTGCGCGATCGCTTCCGGCCGCCATTGCGCGCGCGCGACTGCCA < NC_002947/5333287‑5333140 ACAGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCT > 1:187756/1‑150 AGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGGGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCCGGCGCGCCCGCTCC > 1:537993/1‑150 GACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCC > 2:157488/1‑150 ACCCGGACCTGCTGTTCGCGACGCCAACAGAGGGGCTGGCAGTCGCGCGCGCGCAATGGCGGCCACAGATCAGCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCA < 1:405621/150‑1 CCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCAC < 2:84507/150‑1 GTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGG < 2:547680/150‑1 ATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTG > 1:433853/1‑117 ATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTG < 2:433853/117‑1 CCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGTAAAGGTTCAGCGCAAATCAGCCTCTGGCACCGTGGTCCGCTGCGCGATCGCTTCCGGCCGCCATTGCGCGCGCGCGAC > 1:157488/1‑150 CCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGTAAAGGTTCAGCGCAAATCAGCCTCTGGCACCGTGGTACGCTGCGCGATCGCTTCCGGCCGCCATTGCGCGCGCGCGAC > 2:200582/1‑150 CCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGG < 1:233061/35‑1 CCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGG > 2:233061/1‑35 CACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGTAAAGGTTCAGCGCAAATCAGCCTCTGGCACCGTGGTCCGCTGCGCGATC < 2:95910/120‑1 CACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGTAAAGGTTCAGCGCAAATCAGCCTCTGGCACCGTGGTCCGCTGCGCGATC > 1:95910/1‑120 GGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGTAAAGGTTCAGCGCAAATCAGCCTCTGGCACCGTGGTCCGCTGCGCGATCGCTTCCGGCCGCCATTGCGCGCGCGCGACTGCCA > 1:477004/1‑150 GTAGCCCACAGGCCTTGAAGGGGGCGTGGTTCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGTAAAGGTTCAGCGCAAATCAGCCTCTGGCACCGTGGTCCGCTGCGCGATCGCTTCCGGCCGCCATTGCGCGCGCGC < 1:115449/141‑1 GTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGTAAAGGTTCAGCGCAAATCAGCCTCTGGCACCGTGGTCCGCTGCGCGATCGCTTCCGGCCGCCATTGCGCGCGCGC > 2:115449/1‑141 ACAGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5333100‑5333257 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacaggTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGTAAAGGTTCAGCGCAAATCAGCCTCTGGCACCGTGGTCCGCTGCGCGATCGCTTCCGGCCGCCATTGCGCGCGCGCGACTGCCA < NC_002947/5333287‑5333140 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |