New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5914240 | 7 (0.320) | 9 (0.520) | 7/200 | NT | 61.1% | intergenic (+76/+77) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase |
? | NC_002947 | = 5914280 | 6 (0.350) | intergenic (+116/+37) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase |
CTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGT > NC_002947/5914132‑5914429 | cTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTg > 1:527991‑M2/1‑149 (MQ=255) gcgGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGccc > 1:358117/1‑150 (MQ=255) aCGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgcccgcgaagagggcggcaccggtctcaaacaaaaacgccgcccttgag < 1:398532‑M2/113‑62 (MQ=255) aCGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgcccgcgaagagggcggcaccggtctcaaacaaaaacgccgcccttgag > 2:398532‑M2/1‑52 (MQ=255) aCGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacacaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtaccag < 1:177728‑M2/150‑99 (MQ=255) ccGCTCCGGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggc < 2:444822‑M2/116‑69 (MQ=255) ccGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtaccagttgt < 1:172064‑M2/150‑103 (MQ=255) ccGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggc > 1:444822‑M2/1‑48 (MQ=255) ccGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCgg > 2:54585/1‑150 (MQ=255) gCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCa > 2:312272/1‑150 (MQ=255) cGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgccct > 2:269264‑M2/1‑41 (MQ=255) cGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgccct < 1:269264‑M2/98‑58 (MQ=255) cGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGc > 2:236822/1‑150 (MQ=255) tAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGc > 2:331122/1‑150 (MQ=255) gAAGCCTGTGACTTACCTGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtaccagttgtactcgaggtcggagatcgagtgctcgaa > 2:177728‑M2/1‑20 (MQ=255) aGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGcc < 2:358117/150‑1 (MQ=255) tgGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAgg < 2:129800/44‑1 (MQ=255) tgGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAgg > 1:129800/1‑44 (MQ=255) tgGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATTTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACcagt > 2:192330/1‑150 (MQ=255) | CTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGT > NC_002947/5914132‑5914429 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |