Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	3416379	3416412	34	2 [1]	[1] 3	PP_3029	DNA cytosine methyltransferase family protein

ATGACGGTATGGCGCCAGAAACCCTTGGCCACCCGCCGGCAGGTGTTGTCCACCAGCGGGCGTTTGCGTGCGAACAAGCTCTTGCCCAGGTCGGAAAAGTCGATGCACTCGGCGGCGGTGCGCCAAGGCAATTGCCCTGGTTTCGGGTTC  >  NC_002947/3416412‑3416561  |                                                                                                                                                     aTGACGGTATGGCGCCAGAAACCCTTGGCCACCCGCCGGCAGGTGTTGTCCACCAGCGGGCGTTTGCGTGCGAACAAGCTCTTGCCCAGGTCGGAAAAGTCGATGCACTCGGCGGCGGTGCGCCAAGGCAATTGCCCTGGTTTCGGGTtc  >  2:529360/1‑150 (MQ=255)  tGACGGTATGGCGCCAGAAACCCTTGGCCACCCGCCGGCAGGTGTTGTCCACCAGCGGGCGTTTGCGTGCGAACAAGCTCTTGCCCAGGTCGGAAAAGTCGa                                                 <  1:213096/102‑1 (MQ=255)  tGACGGTATGGCGCCAGAAACCCTTGGCCACCCGCCGGCAGGTGTTGTCCACCAGCGGGCGTTTGCGTGCGAACAAGCTCTTGCCCAGGTCGGAAAAGTCGa                                                 >  2:213096/1‑102 (MQ=255)  |                                                                                                                                                     ATGACGGTATGGCGCCAGAAACCCTTGGCCACCCGCCGGCAGGTGTTGTCCACCAGCGGGCGTTTGCGTGCGAACAAGCTCTTGCCCAGGTCGGAAAAGTCGATGCACTCGGCGGCGGTGCGCCAAGGCAATTGCCCTGGTTTCGGGTTC  >  NC_002947/3416412‑3416561

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑